Gene Bcen_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0393 
Symbol 
ID4091751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp432340 
End bp433200 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content63% 
IMG OID638013652 
Productrhamnosyltransferase 
Protein accessionYP_620278 
Protein GI107021951 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID[TIGR01556] L-rhamnosyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGTGT TCTACCGACC GGATAGCGGT TGCGTAGCCC GTGCGAACCG GCTCGCCAAA 
GTATGGCCAT GCGTGGTGGT GGATAACACG GAGAGCATCA GTGCGCCGGA AGCGCTCGGG
CTCGACGCGC GTATCGACTA TGTCGCGAAC GGCGCCAATC TTGGCATCGC GACGGCGCTC
AACCAGGGCA TCGAACGGCT GGCCGCGGCG AACTGTACGT CGGTATTGCT GTTCGATCAG
GATAGCGAGC CGTCAGACGA ATTGCTGGTC GAACTGCCTC GCACAATGGC GGCCGAGCGC
ATGCGTAATC GTCGCGTGGC GCTCGTCGGT CCCGCGTACG AGGATGCGCG ATTGGGCGGC
GTCGCGCCGT TCGTCCGCTT CGGGTACGTG AAGTTGCGCC GGGTTCAGCC GGACGGTGTG
CGACCGGTCG AGGTCGACTT TCTGATTACG TCGGGATCGT GCGTGAATCT CGCTGTATGG
CGTGACATCG GCCCGATGGA CGATTCGCTC TTCATCGATT TCGTCGATCT CGAATGGTGT
GTCCGCGCGC GCTCGAAGGG GTATTCGGTG CTCGGCGCGC CGGCGTTGCG GTTGAAGCAC
GAACTGGGCG GCGAGCCGGT GAAGGTGTTC GGGCGGAGCT ACCCGGGGCA CAGCGCGGTT
CGGCACTACT ATCTGTTCCG CAACGCGGTC GCGCTGATCC GGCGTTCCTA CGTACCCTGG
AGCTGGAAGT CGACCGAACT GGTCAAGATG CCGGTCCGGC TTGCGATTTA TGCGTTGTTC
ATGCAGCCGC GAATGGCGCA CCTCCGGCTC TCATTGCTCG GCATCTGGCA CGGACTGACC
GGTCGTACCG GTGCGCTCTG A
 
Protein sequence
MIVFYRPDSG CVARANRLAK VWPCVVVDNT ESISAPEALG LDARIDYVAN GANLGIATAL 
NQGIERLAAA NCTSVLLFDQ DSEPSDELLV ELPRTMAAER MRNRRVALVG PAYEDARLGG
VAPFVRFGYV KLRRVQPDGV RPVEVDFLIT SGSCVNLAVW RDIGPMDDSL FIDFVDLEWC
VRARSKGYSV LGAPALRLKH ELGGEPVKVF GRSYPGHSAV RHYYLFRNAV ALIRRSYVPW
SWKSTELVKM PVRLAIYALF MQPRMAHLRL SLLGIWHGLT GRTGAL