Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3184 |
Symbol | |
ID | 4082520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 3340785 |
End bp | 3341030 |
Gene Length | 246 bp |
Protein Length | 81 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638011569 |
Product | post-segregation antitoxin CcdA |
Protein accession | YP_618220 |
Protein GI | 103488659 |
COG category | [R] General function prediction only |
COG ID | [COG5302] Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.150063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTC CGGCGCGATT CGAAGGCCCG AAAAAACCGA CCAATGTGTC GTTGAACGCC GAACTGGTCG AGGAAGCCCG GCGGCTGGAG ATCAATGTCA GCGAAGCATG CCAGTCGGGG TTGGCGGCCG AGGTGAAGAA AGCCCGCGAG GCCGCCTGGA AAAAAGAAAA TCGCGCCGCG ATCGAAAGCT GGAACGACTA TATTCGCGAG AACGGGATGC CCTATGACGA GTATCGGCAG CTTTGA
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Protein sequence | MNRPARFEGP KKPTNVSLNA ELVEEARRLE INVSEACQSG LAAEVKKARE AAWKKENRAA IESWNDYIRE NGMPYDEYRQ L
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