Gene Sala_3184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3184 
Symbol 
ID4082520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3340785 
End bp3341030 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content58% 
IMG OID638011569 
Productpost-segregation antitoxin CcdA 
Protein accessionYP_618220 
Protein GI103488659 
COG category[R] General function prediction only 
COG ID[COG5302] Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.150063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTC CGGCGCGATT CGAAGGCCCG AAAAAACCGA CCAATGTGTC GTTGAACGCC 
GAACTGGTCG AGGAAGCCCG GCGGCTGGAG ATCAATGTCA GCGAAGCATG CCAGTCGGGG
TTGGCGGCCG AGGTGAAGAA AGCCCGCGAG GCCGCCTGGA AAAAAGAAAA TCGCGCCGCG
ATCGAAAGCT GGAACGACTA TATTCGCGAG AACGGGATGC CCTATGACGA GTATCGGCAG
CTTTGA
 
Protein sequence
MNRPARFEGP KKPTNVSLNA ELVEEARRLE INVSEACQSG LAAEVKKARE AAWKKENRAA 
IESWNDYIRE NGMPYDEYRQ L