| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3168 |
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| Symbol | |
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| ID | 4082504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3318722 |
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| End bp | 3321109 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638011553 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_618204 |
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| Protein GI | 103488643 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.43685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.501895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAATA TGTCGAAAGT GCTGGTGCGG CGCAGCGCGA TGCTGCTCGG CGGCACCATC
CTGGCCACGT CGGGCACGGC GTTGGCGCAG CAAGCAAATA CAGAGGGCGA CAATGACATC
GTCGTCACCG CGTCGAAGCG CGAGGAAAAT CTGCAGGACG TGCCGCTGGC GATCACCGCG
ATCGGCAACG AACGGCTCAG CGAATTGCAG GTCAAGGAGT TTCAGGACGT CGTCAAGTTC
CTGCCCTCCG TGACAATCCA GACCGCGGCG CCGGGGTTCA GCCAGGTTTA TTTCCGCGGT
GTGGCGTCGG GCGAGAATGC CAACCACTCG GCGTCGCTGC CGACGGTCGG CACCTATCTG
GACGAAATGC CGATCACGAC GATCCAGGGC GCGCTCGACA TCCATGCCTA TGACCTGGCG
CGCGTCGAGG CGCTCGCGGG GCCGCAGGGT ACGCTCTACG GCGCCAGCTC GATGGCGGGC
ACGATCAAGC TCGTCACCAA CCGGCCCGAC CCCAGCGGCA CCTACGGCTC GGTGGGGCTC
GAACTCAACA GCGTCGCGCA CGGCGACGTC GGCGGCGTCG CCGAAGGCTT CGTCAACGCC
CCGCTCGGCG AACGCGCGGC GCTGCGCCTC GTCGGCTGGT ATCGCCACGA TGCGGGCTAT
ATCGACAATA TCGCGGGCAG CCGCACCTAT CCGACCAGCG ACATCACCCA GGACAATGCC
GCGCTGGTCG AAAAGAATTA CAACGACGTC GATACCTATG GCGCGCGGCT TGCACTCGGC
ATCGACCTTG ACGACGATTG GACGATCCGC CCCACGCTGA TGGGGCAGGT GCAGAAAACC
AATGGCAGCT TTGCCCAGGA GCGGTCGACT GCGGTCAGCG ACGACCTTCA GACCGTGCAA
TATAATCCCG AAAACTCGAA GGACCGGTGG ATTCAGGCCG CGCTGACGAT CGAAGGCAAG
CTGGGCAATT GGGATCTGAC CGTCACGGGC GGCCACCTGC GCCGGAAAAC CGAGGTCGAA
AGCGACTATT CGGATTATGC CTATTTCTAT GATGCGCTCT ACGGCTATGG CGCCTATTTC
TATGATAACA ACGGCGACCT TATCAGCCCG AATCAATATA TCCAGGGCAT CGACCGGTAC
AAAAAGAGCT TTGTCGAGGC GCGCGTCGCC TCCCCGGCCG ACGCGCGCAT CCGCTTTATC
GGCGGACTGT TCTGGCAGCG TCAGTCGCAC AATATCGAAC AGAATTACAT TATCGACAAC
CTGACGGACC TGTTCACGGT CACGGGCACT GACAGCAATA TCTGGCTGAC CAAGCAATTG
CGTATCGACC GCGACTATGC GGCGTTCGGC GAGATCAGCT TCGACATCAC CGACAAATTG
ACGCTGACCG GCGGCGGCCG CGTGTACAAG TTCGACAACA GCCTGGTCGG CTTCTTCGGC
TATAATGCCA ATTTCTCCAG CCGAACCGGC GAAGCCGCCT GTTTTGCCGG TCCAATCATT
TCCGGGACGC CATGCACCAA TCTCGACAAG CGGACGAAGG ACAGCGACTT CATCCACAAG
CTCAATCTGA CCTACAAGTT CAGCGATGAC GCGCTTGTCT ATGCCACCTG GTCGCGCGGT
TTCCGCCCCG GCGGCATCAA CCGCCGCGGA ACGCTGCCGC CCTATGGCCC CGACACGCTC
GACAATTATG AGTTCGGGTG GAAAACGAAC TGGGGACCGG TGCGTTTCAA TGGCGCCATT
TATCAGGAAG ACTGGACCGA CATCCAGCTT TCCTTCCTCG GTCTCAACGG CCTCACCGAA
ATCCGCAACG CCGGGGTCGC GCGCATCCGG GGGATCGAAA TCGACCTCGG CTATCGCCGG
AACGGTTTTT CGATCAACGC GGGCATGAGC TATAATGACG CCGAAATCCG CCGCGATTTC
TGCCGCATCG CCAATGACAG CTTCGACTGC ACCCTGCCCG GATCGGACGG CGCGGACAAT
GCGCTCCTCG CGCCAAAGGG CACCAGCCTG CCGGTGACGC CCAAGTTCAA GGGCAATGTC
GTCGCGCGTT ACGAGTTTCC GGTCGGCGGC ATGGACGCGC ATGTGCAGTT TGCTGTGAAC
CATATCGGCA AGCGGCGCAG CGACCTCAGA ACCTTTGAGA ACAGCCTGAA GGGCTTTTTT
GATGCCTATA CCACCGCCGA CCTCAGCGTC GGCGTCAAGG GCGACGACTG GAAAGCGGAA
CTGTTCGCGA CCAACTTGTT CGACGAAAAT GGCGTCATCA ACTCGGGCGT CCAGTGTCTG
GAGACGACAT GCGGCGATCC CGACGGCATC AGCAGCACGG GCGGCGTCTT CTACGACACG
GTCATCCGCC CGCGGCTGAT CGGAATCAAG GTGAGCAAGG ACTTCTGA
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| Protein sequence | MRNMSKVLVR RSAMLLGGTI LATSGTALAQ QANTEGDNDI VVTASKREEN LQDVPLAITA
IGNERLSELQ VKEFQDVVKF LPSVTIQTAA PGFSQVYFRG VASGENANHS ASLPTVGTYL
DEMPITTIQG ALDIHAYDLA RVEALAGPQG TLYGASSMAG TIKLVTNRPD PSGTYGSVGL
ELNSVAHGDV GGVAEGFVNA PLGERAALRL VGWYRHDAGY IDNIAGSRTY PTSDITQDNA
ALVEKNYNDV DTYGARLALG IDLDDDWTIR PTLMGQVQKT NGSFAQERST AVSDDLQTVQ
YNPENSKDRW IQAALTIEGK LGNWDLTVTG GHLRRKTEVE SDYSDYAYFY DALYGYGAYF
YDNNGDLISP NQYIQGIDRY KKSFVEARVA SPADARIRFI GGLFWQRQSH NIEQNYIIDN
LTDLFTVTGT DSNIWLTKQL RIDRDYAAFG EISFDITDKL TLTGGGRVYK FDNSLVGFFG
YNANFSSRTG EAACFAGPII SGTPCTNLDK RTKDSDFIHK LNLTYKFSDD ALVYATWSRG
FRPGGINRRG TLPPYGPDTL DNYEFGWKTN WGPVRFNGAI YQEDWTDIQL SFLGLNGLTE
IRNAGVARIR GIEIDLGYRR NGFSINAGMS YNDAEIRRDF CRIANDSFDC TLPGSDGADN
ALLAPKGTSL PVTPKFKGNV VARYEFPVGG MDAHVQFAVN HIGKRRSDLR TFENSLKGFF
DAYTTADLSV GVKGDDWKAE LFATNLFDEN GVINSGVQCL ETTCGDPDGI SSTGGVFYDT
VIRPRLIGIK VSKDF
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