| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3142 |
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| Symbol | |
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| ID | 4082398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3293700 |
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| End bp | 3294626 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638011527 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_618178 |
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| Protein GI | 103488617 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCAGG ATTTAACAAT CCCCCATGGG GCGCTCGACG GGATCGAAGC TTTCCTGCGC
GTTGCGGAAA GGCGGAGCTT TTCCGCCGCG GCGGCCGACC TCGGCGTCTC GCCCTCGGCG
ATCAGCCAGA CGATCAAGGC GCTCGAGGCG CGCGTCGGCG CGCCGCTGTT CATGCGCACC
ACGCGCAGCG TCGGGCTGAC CCAGGCGGGC GAGATGTTCT TCGAACGCGC CGCACCTGCC
TATTCGGGGC TTGCCGACGC CTATGAGGCG GCGCGCAACC TCGGCAACCG TCCCGCGGGA
CGCTTGCGCA TCAATCTGAT GCGCGGCGCG GTGCAGCCGC TGTTCGAACC GATCATCGCG
GGCTTTTGCG AAACCTATCC CGAAATCGAG CTTGAAATCT ATGCCGACGA CGCGCTGTCG
GATCTGAGCG CGGGCGGGTT CGACGCCGGG GTGCGGATGG GCGAATCGCT CGACGCCGAT
GTCGTCGCGG TCCGGCTGAC CGGCCCCTTT CGCTTCGTCG TCGCCGGCGC GCCGTCCTAT
TTCGCGCGCC ATGGCCGCCC CGCAACGCCC GAGGCGCTGC GCGAGCATCG CTGCGTCCGC
TTTCGCCTCG CCACCGGCGC GCTGATGCCA TGGACCTTTG AAAAGGGGAA TCGCGAGTTC
GACGTCGCGG TGACCGGCCC GGTGATCGTC AACGACTGGA GCGCGTCGCT CGTCGCGATG
CGCACCGGTG TCGCGCTTGG CATGATGGCC GAACCGATGG CGACGGCGAT GGTCGACGCG
GGCGAAATCG AGCTGGTGCT CACCGACTAT GCCGCCTCGA CCTCCGGCCT CTTTCTCTAT
TATCCCGGCC GCAAGCAGGT GATGCCCAAG CTGCGCGCCT TCATCGACTA TGTGCGCGAC
AATCTCCCCG ACGACATAAC CCGCTGA
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| Protein sequence | MKQDLTIPHG ALDGIEAFLR VAERRSFSAA AADLGVSPSA ISQTIKALEA RVGAPLFMRT
TRSVGLTQAG EMFFERAAPA YSGLADAYEA ARNLGNRPAG RLRINLMRGA VQPLFEPIIA
GFCETYPEIE LEIYADDALS DLSAGGFDAG VRMGESLDAD VVAVRLTGPF RFVVAGAPSY
FARHGRPATP EALREHRCVR FRLATGALMP WTFEKGNREF DVAVTGPVIV NDWSASLVAM
RTGVALGMMA EPMATAMVDA GEIELVLTDY AASTSGLFLY YPGRKQVMPK LRAFIDYVRD
NLPDDITR
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