| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3132 |
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| Symbol | |
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| ID | 4082388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3283910 |
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| End bp | 3284893 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638011517 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_618168 |
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| Protein GI | 103488607 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.901985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG CGGGGGCCTA TGACGCCGAC GCCCTCCACG GTTTCGCGCA CGACAGCATC
GCGCGCGGGT CGAAAAGCTT TGCTCTCGCG AGTCAGCTTT TCGACCGCGA AACGCGCGAG
CGCGTCTGGC TGCTTTACGC CTGGTGCCGC GCGGCCGATG ACCTGACCGA CGGGCAGGAT
CATGGCGGCA CGATGGCGCC GGGACACGAT TCCGCAGCGG CCGTCGAGCG CATCCGGGCG
CTGACCGACC AGGCCTTTGC GGGCGCGCCG ACGGGCGATC CGGCGTTCGA CGCGCTGGGT
TTCCTGCTCA CCGAGGTGGC GATCCCGCGC GCGGTTATCG ACGATATCGT CGCGGGATTC
GATCTCGATG CAAGGGACTG GCGGCCGCGC AGCGAGGACG ATCTGCTGCG CTATTGCTAT
CATGTTGCGG GCGCGGTCGG CGTCGCGATG GCGCTGGTGA TGGGAATCGA CCCCGATGAC
GAGCGCACGC TCGACCGTGC ATCCGACCTC GGCATCGCGT TCCAGCTTGC CAATATCGCG
CGCGACGTGG CCGAGGATGC CGCCGCCGAC CGCTGTTACC TGCCCGTCGA ATGGATGGTC
GAACTCGACA TTCCGCCGGG GCAGCATATG CACCCCGCCT TTCGCCCCCG GCTCGCCGTG
ATGGCAAAAT GGCTCGCCGA AATGGCGGAA GAATATGAAG CGTCGGCGCG CTGGGGCGCC
CGCAAACTGC CGCCGCGCAG CCGCTGGGCG GTGCTCGCCG CCGCGGGCAT TTATGGCGAC
ATCGCGCGCG AGGTGCGGCG GCGCGGCGAT CATGCGTGGG ACCATCGCGC CGCAAGCTCG
CTCGCCGCCA AACTGGGCTG GGTTGCGCGC GCGGGCTGGT CGGTGCTCCG CCGCCCGCCA
GAGCGACGGA TCAGCCGCGA GGGGCTGTGG ACGCGGCCCC GGCCGGACGG CGTACACACG
CACGGGGAGT GCGCAGGCGC ATGA
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| Protein sequence | MTEAGAYDAD ALHGFAHDSI ARGSKSFALA SQLFDRETRE RVWLLYAWCR AADDLTDGQD
HGGTMAPGHD SAAAVERIRA LTDQAFAGAP TGDPAFDALG FLLTEVAIPR AVIDDIVAGF
DLDARDWRPR SEDDLLRYCY HVAGAVGVAM ALVMGIDPDD ERTLDRASDL GIAFQLANIA
RDVAEDAAAD RCYLPVEWMV ELDIPPGQHM HPAFRPRLAV MAKWLAEMAE EYEASARWGA
RKLPPRSRWA VLAAAGIYGD IAREVRRRGD HAWDHRAASS LAAKLGWVAR AGWSVLRRPP
ERRISREGLW TRPRPDGVHT HGECAGA
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