| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3113 |
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| Symbol | |
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| ID | 4082700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3262670 |
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| End bp | 3263314 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638011499 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_618150 |
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| Protein GI | 103488589 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.527228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCAATCG AAATGATACC AGACAGTACG CCTGCTATCG ACGACGCCGC CGGGGCGCGC
CGCAAGGCTT TCGTCGACGC CGCGCGCGAG CTGTTTTTTG CGAACGGCTA TGCGGGAACG
ACGATGTCTT CGATAGCCAG CAAGGTCGGC GGCTCGAAAA CCACGCTCTG GACCTATTTT
CCGTCGAAGG AAGATTTGTT CGCCGCGGTG GTTGACGATA TCGTCGAGCG CCATGGTCAT
GCGCTGACCG TCGACCTGCC GATCGACGCG CCCGTCCCCG ACGTGCTCCG CAACTTCGGC
ATGACATTGA TGACCAAGCT GACCGCCTCG CCGCTGCTTT CGCTCTACCG GCTGGTCGTG
GGCGAGGCCG AGCGCTTTCC GCATCTCGCC GAGACCTTCT ACGACCGCGG GCCGCGCCGC
GGCAAGGCGC GCGCCGCCGC CTGGGTCGCC GAAAAAATGG TGCGCGGCGA GATCCGCCAG
GGCGACCCGA TGCGCGCGGT GCAGCAGTTC GCCGGTCTCT GCCAGTCGGG GCTGTATCAG
TTCGCGGTGC TGAGCCTCCC CGAAAGCCGC GATCTCAGCC ACCTTTCGGA AGAAGTCGAT
GCCGCGGTCG ACACCTTCTG CCGCGCCTGG CAAATCGAGA AATGA
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| Protein sequence | MSIEMIPDST PAIDDAAGAR RKAFVDAARE LFFANGYAGT TMSSIASKVG GSKTTLWTYF
PSKEDLFAAV VDDIVERHGH ALTVDLPIDA PVPDVLRNFG MTLMTKLTAS PLLSLYRLVV
GEAERFPHLA ETFYDRGPRR GKARAAAWVA EKMVRGEIRQ GDPMRAVQQF AGLCQSGLYQ
FAVLSLPESR DLSHLSEEVD AAVDTFCRAW QIEK
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