Gene Sala_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3103 
Symbol 
ID4082839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3251365 
End bp3251928 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content71% 
IMG OID638011489 
Producthypothetical protein 
Protein accessionYP_618140 
Protein GI103488579 
COG category[S] Function unknown 
COG ID[COG3743] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.298396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTGGC TTCAGGAAAA CTGGATTATC GCGCTCGTCG GCCTCGTCGT GGCTGTCGTG 
CTGCTCTGGT GGCGGTTCGG CCGCGCCAGG CCGACCGGAC CCGCGCTGCC GACCGCGGAG
CCGCCAAAGC CCGCCAAGCC GCTCGAACCC GTCAAGCCCG AAATCGTCGC GGCCGAAGCC
GCGCGCTTCA AACCAATCGA GCCCCGGCCG CGACCCGTGC CGCCGCCCGT CGCCGAACCC
GCGGTCGAGG CCGCGGCAAT CCCCGCCGAA CCGACGGTCC CGCCGCCCCC AGCGCCCGCA
CCGACGGCCG CCAAGGCCGA TAATCTGCAA CTCCTGAAGG GCGTCGGCCC CAAGCTCGGC
GCGCTGCTGA ACGGCCTCGG CATTACCCGC TTCCAGCAGA TCGCCGACTG GACCGACGCC
GACGTTGCGC GCATCGACGC ACAGCTCGGC GCCTTCCAGG GCCGCATCGC GCGCGACAAC
CTGATCGACC AGGCCAGCTA TCTCGCGCGC GGCGACAAGG CCGGGTTCGA GGCGAAATAT
GGCGCGCTGA GCGGAGAGCC TTAG
 
Protein sequence
MTWLQENWII ALVGLVVAVV LLWWRFGRAR PTGPALPTAE PPKPAKPLEP VKPEIVAAEA 
ARFKPIEPRP RPVPPPVAEP AVEAAAIPAE PTVPPPPAPA PTAAKADNLQ LLKGVGPKLG
ALLNGLGITR FQQIADWTDA DVARIDAQLG AFQGRIARDN LIDQASYLAR GDKAGFEAKY
GALSGEP