Gene Sala_3044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3044 
Symbol 
ID4083052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3194476 
End bp3195258 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID638011430 
Product2-keto-4-pentenoate hydratase, putative 
Protein accessionYP_618081 
Protein GI103488520 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.111412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAA CCAGCGATCC GGAAAATGTG GCGCGCGCAT TTATCGACGC GCGTGCGGGA 
AAGACACCGC TTACCGTCTA TCCCGGCGCG TTTCCGCAAA CGATGGCGGA GGCCTATGCG
ATCCAGGATC GCGCGATCGC CCTCGACGGG CGGCGCGTCG GCGGGTGGAA GGTCGGACGA
ATCGCCCCCG AACTCGTCGA CCGCTTTGGC GGCAATCGCC TGACCGGCCC GATCTTCGCC
GACGAAATCG TCGACGGTGC CGCCGATCCG GCGATGCCGG TCTATGCCGA CGGCTTCGCC
GCGGCCGAGG CAGAGGTGTT GCTCTGTTTC GGCGAGGTGG GCCCGCGCGA CTATAGCATC
GACAGCGTGA AGCAGTGCAT CGCCGACGTG CGCACGGGGA TCGAGATCGC TAGCTCGCCT
TTCCCCGAAA TCAACCGCCA CGGTCCCGCA GTGACGGCGT CCGACTATGG CAACAACAAG
GGGCTGATCC TCGGCCCGTC GATCCCCGAC TGGCAGGATG CCGACCTCAT CCACATGCCC
GTCGAGATGT TCGTCGATGG CGCGCGCGTC GGCGCCGGGA CGATGGAGGC GATGCTCGAC
GGCCCGTTCG GATCGGCGCT GTTCCTGATC GACACATTGC GCGCGCGCGG CATTGCAATT
GCGCCCGGCA CCTGGGTGTC GGCGGGCGCG ATCACCGGTA TTCACGAGGT CCGGCCCGGC
CAGCGGGCCG AAGCGCTGTT CGACGGAAAG ATCCGCGTCG GCTGCACGAT CACAAGTTAT
TAG
 
Protein sequence
MAATSDPENV ARAFIDARAG KTPLTVYPGA FPQTMAEAYA IQDRAIALDG RRVGGWKVGR 
IAPELVDRFG GNRLTGPIFA DEIVDGAADP AMPVYADGFA AAEAEVLLCF GEVGPRDYSI
DSVKQCIADV RTGIEIASSP FPEINRHGPA VTASDYGNNK GLILGPSIPD WQDADLIHMP
VEMFVDGARV GAGTMEAMLD GPFGSALFLI DTLRARGIAI APGTWVSAGA ITGIHEVRPG
QRAEALFDGK IRVGCTITSY