Gene Sala_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3027 
Symbol 
ID4082858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3172263 
End bp3173300 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content69% 
IMG OID638011413 
Producthypothetical protein 
Protein accessionYP_618064 
Protein GI103488503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT CCGTCCGACG GCCCATCCTT GCGGCGCTGC TCGCCGCGGC CGCGCCGCTG 
CTGCTCGGCG CAACGCCTTC TCCCGCGACG CCGCCTTCTC CCGCGGCGAC GCCCGGCCCG
GCGGCCGAAA CCGGCGCGCC GCCGGTCGGG GTCGTGCCTT TCATCGAACC CTTCGACCTC
GACGCGACGC GGCGCATGGC GGTTCAGGTC ATGATCGACG GCAAGGGCCC CTTTTCCTTT
CTCGTCGACA CCGGCGCCGA ACGCACGGTG ATCGCGCGCG AACTCGCCGA CCGGCTGGGG
CTTGTCGAGG GCGAAAAGTT GCGGATGGCG ACGATCGGCG GATCGGCGAC GGTGCCGAGC
TATCATGTCG CGGCGCTCCA GATGACCAGG CTGCATCTGG CCAAGGTCAA TGCCCCGGCG
TTTCACGGCC GCCATATCGG CGCGGCGGGG CTGATCGGCG TCGATATGCT CGAGGAACGA
CGCGTGCTCA TCGATTTCCG CGACGAGACG ATGGAGATAT TGGAAACGCG CAAGCGCGCG
CGGCCCGTGA TCCGCGACGA TGACGCCATC GTCGTCACGG CGCGCAATTC GGCGGGGCGG
CTGATCCTGT CCGACGCGCG GCTGAACGGC CGGCGCATCG ACGTCATCGT CGACACCGGC
GCCCAAACCA GCGTCGGCAA CCTCGCTTTG CAGCGGCTGG TGGCCGAAAA GCGCGCGAAC
CGGCTGCCCT TCCTGCCGAC GACCCTCGCC GCGGTGACAG GTGAGGACGT GCAGGCGACG
CGCACCGCGA TCAAGCGCAT CGTCATCAAC GGCATGGACA TCAACGATCT TCCCGTCAGC
TTCGCCGACA GTCAGGCGTT CCGCGCGCTC GGGCTCGATG AGCGCCCGGC GTTGCTCCTC
GGCATGGACA GCCTGTCGCT GTTCGACCGG ATCGAGATCG ACTTTCCGAA CAAGCGCGTC
GTCTTCGACC TGCCCGAACG CGCGCACCGC AATGCGGGGC AGCGCTTCGC GGCGAATGGG
GGCGCGTTCG GGGGGTAG
 
Protein sequence
MTRSVRRPIL AALLAAAAPL LLGATPSPAT PPSPAATPGP AAETGAPPVG VVPFIEPFDL 
DATRRMAVQV MIDGKGPFSF LVDTGAERTV IARELADRLG LVEGEKLRMA TIGGSATVPS
YHVAALQMTR LHLAKVNAPA FHGRHIGAAG LIGVDMLEER RVLIDFRDET MEILETRKRA
RPVIRDDDAI VVTARNSAGR LILSDARLNG RRIDVIVDTG AQTSVGNLAL QRLVAEKRAN
RLPFLPTTLA AVTGEDVQAT RTAIKRIVIN GMDINDLPVS FADSQAFRAL GLDERPALLL
GMDSLSLFDR IEIDFPNKRV VFDLPERAHR NAGQRFAANG GAFGG