Gene Sala_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2948 
Symbol 
ID4080990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3091177 
End bp3091656 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content72% 
IMG OID638011333 
ProductMarR family transcriptional regulator 
Protein accessionYP_617986 
Protein GI103488425 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCG AGATCGCCAC TGCCACGTTG AAGGCGCTGC GCCGCGTCCT GCGCGCGGCC 
GAGGGCGGGA CACGGCGGAT CGCCGCGGCG ACCGGGCTCA CTCCGTCACA GCTGCTCGTG
CTGCGCGAGA TCGACGCGGG CGGCAATGTG ACGCCGGGCC TTGTGGCGCA GCGGCTGGAG
TTCGGCCATG CAACGGTGAC GGCGATCGTC GACCGCCTCG TCGCGCTCGA CCTCGCGACG
CGCTCGCGCA GCGCCGAGGA CAAACGACGC GTGCTGCTCG CCGCGACCGG CAAGGGCCGT
CGCTGCCTCG CCGAAGCGCC CGACATGCTG CAGGAAATCT TCGCCGCACG CTTCGCCGCG
CTGCCGGCGT GGGAACAGGC GATGATCCTT GCGGGGACCG AGCGGCTCGC CGACATCCTC
GGCGTGCGCG AAATGGACGC CGCGCCGCTG CTCGACACGG GGGCGATCGA CCGCATCTGA
 
Protein sequence
MESEIATATL KALRRVLRAA EGGTRRIAAA TGLTPSQLLV LREIDAGGNV TPGLVAQRLE 
FGHATVTAIV DRLVALDLAT RSRSAEDKRR VLLAATGKGR RCLAEAPDML QEIFAARFAA
LPAWEQAMIL AGTERLADIL GVREMDAAPL LDTGAIDRI