Gene Sala_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2928 
Symbol 
ID4081123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3073819 
End bp3074154 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content67% 
IMG OID638011313 
Productflagellar motor switch FliN 
Protein accessionYP_617966 
Protein GI103488405 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG TAGCCGACGC GCCAAAGGCG GCGCGCGCCG ACCGGCGCGA CAAGAGCATC 
GCCGCCGCGC CCAATTTCGA CCTGCTCGCC GGCGTTTCAC TGCGCGTGTC GGTCGAGGTC
GGGTCGACCT CGATGACGCT CGCCGAACTG CTTGCGCTGG GCGAAGGCAG CGTGATCGAG
CTTGATCGCG CCGCGACCGA CCTGCTCGAC ATCTATGCCA ATGGCACATT GATCGCGAAG
GGCGAGATCG TCAGCGTCGA TGGCCGCTAC GGCATCCAGG TCGCCGAAGT CGTCGCGCCC
GCGCGCGGCC TCGAAGGTTT CGAGCGGAGA GCCTGA
 
Protein sequence
MTDVADAPKA ARADRRDKSI AAAPNFDLLA GVSLRVSVEV GSTSMTLAEL LALGEGSVIE 
LDRAATDLLD IYANGTLIAK GEIVSVDGRY GIQVAEVVAP ARGLEGFERR A