Gene Sala_2921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2921 
Symbol 
ID4081116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3068741 
End bp3069130 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content67% 
IMG OID638011306 
Productflagellar protein FliS 
Protein accessionYP_617959 
Protein GI103488398 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCA CCGCATCGAC CGTCCGGGCG ACCGGGCTTT ACCGCCGATT GCAGAATGAG 
AGCCGCGCCG CCGCCGCCGA TCCGGTCGAG CTGGTGACGA TGCTCTATGA CGAGCTTGAA
ACCGCGGTCG GCGTTCTTGA AGCCATGGTG CGCCAGGGTC AGCGGATTTC CGCGACCGAA
CCCGCACATC GGGCCCGCGC AATCCTGATC GGACTCGACG TCAATCTCGA CCATGACAAG
GGCGGCGACG TCGCGGCGGC GTTGTCGCGT GTGTATCGCA GCATGCGGCG CAAGCTCGAC
GACGCGGTGG CAGCGAACAG TGCCGATGCG CTCGCCGAAC TGCTCGAGGG CATCCAGACG
ATCAGCGCCG CGTGGCGGCA GCTTCGCTGA
 
Protein sequence
MTATASTVRA TGLYRRLQNE SRAAAADPVE LVTMLYDELE TAVGVLEAMV RQGQRISATE 
PAHRARAILI GLDVNLDHDK GGDVAAALSR VYRSMRRKLD DAVAANSADA LAELLEGIQT
ISAAWRQLR