Gene Sala_2909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2909 
Symbol 
ID4080933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3058517 
End bp3058819 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content63% 
IMG OID638011294 
Productflagellar hook capping protein 
Protein accessionYP_617947 
Protein GI103488386 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.298578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA ACGGTATCAG CAACAACAAC CCCGTGTTCC ATTCGCCGGG CACCAGCCAG 
CAGATGGGTC AGAGCGATTT CCTGCGTCTG ATGACCGCGC AGCTGTCGCA GCAGGACCCG
TTCAACCCGG TCGACAACAC CGAGATGGTC GCGCAGATGG CGCAATTCTC GAGCCTCGCC
GGGATCAGCG AAACCAACAC CGTCCTCGCC CAGATTTCGG AGCAGCTCGC GGCGCAGACG
CAGCTGCTTC GGGACATCAA GGCCGCCACC CCGGCGCCCG CCCCCACCAC CCAGGAAGGA
TAA
 
Protein sequence
MSINGISNNN PVFHSPGTSQ QMGQSDFLRL MTAQLSQQDP FNPVDNTEMV AQMAQFSSLA 
GISETNTVLA QISEQLAAQT QLLRDIKAAT PAPAPTTQEG