| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2873 |
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| Symbol | |
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| ID | 4080666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3023774 |
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| End bp | 3025300 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638011257 |
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| Product | O-antigen and teichoic acid-like export protein |
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| Protein accession | YP_617911 |
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| Protein GI | 103488350 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.793444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.427284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCCAGA CGGACAGCGC AGCCGCGCCC CTTTCGCCCC GTGCATCGCC GCAGGACGCC
GACACCGTTG CGCTTGCCAA GGGCGGGCGC ACCAACTTTT TCGGCTTCAT CCTGCGCCTC
GTCGCGCGCC TGCCCTTTCT CTATGTCGCG GGCCGCTGGT ACGGGCCCGA AGCGGTCGGG
CGTTTCGCCT TTGCGGTGCT GGTCATCGAA CTTGTCGCGC AGCTCGCGAC GCTCGGCCTC
AAGCGCGGCC TCGCCGAACA GCTGAGCGCG CCCGGCGCCG ACCAGCGCAC CGTCGTCTGG
GACGGCATGT TCGTGGCGTT CCTGGCCTCG GCCGCGGGAT CGGTGCTGCT CCTCCTGCTG
CCGCAGCTCA TGTATCCCGC GGGCAACATC AACGAAATCG ACCGCTGGAT GGCGTGCCTC
GTCTTTGTGA TCGCGGGGAC CGACATCGCC CTGGCCGCGT GCGCCTACAA GTTCGACATC
GGCGCCACGG TGCGCGCGCG CGCGATCGTC GAACCGTGGG TGATCAGCGC CGCGGCGGCG
GGATTCTGGT TCGTGTCGGC CGAAAACGGG CTGATGCTGT CCTATGCCGC GGCGATGCTC
GGCGCCTTCC TGACCGCGCT CATCCCGATG GTCCGCCATT TCGGAGGGCC GGGCGTATGG
CGACCGCACC CCGCGCAGCT CATCACGCTG GCGCGGCGCA ACGCCCCGCT CGCCGCCGCC
GACGCGATCG AATGGGGGAC ACGCCGCCTC GACCTCTTCA TCCTTGGCCA GTTCACCTCG
CCGACGATCT ACGGCATCTA TTATATGGCG CAGCAGGTCG CCTCGCTGCC GCAAAAGCTC
AAGACGAGCT TCGAGCCGAT TCTCGGCCCC GTCATCACGC GCAATCTCGC CGAAAAGCGG
CTTTCCGCGG TCGCGGCGCA GGTGAGCCAG GTCGGCTTCT GGATCATCGC CGCGCAAGCC
GGGGTCGCGC TGGCGCTCGG CATTCCCGGT GAGGCGGTGA TGGGGCTCGT CGGTCCCGAG
TTTGTGAGCG GCACCGCCGC GCTCGCCTTC CTGCTCGCCG CCGAGGTCGT CGCTGCCACC
GCCGTGGTCA GCGAAGCGGC GCTCGTCTAT GTCGCGCGCC ACCGCAACCT GCTCATCAGC
ATCGCGACGC TCGCGCTGCA GGCGGCGCTC AGCGTCGCAC TGATCCTGAT CGCGCAGTCG
ATGGGCTTGC CGCCGATCTA TTATGCCGCG GCGGTCGCGC TCGCGCTGAT GATCGCGCTC
GGCTTTGCGT CGCTGGTCAA GGCGCGCCTC CTCTCGCACA TCCTTGGCGC GCCGGTGAAC
AGCCTGCGCT GGGCGCTCGT CTGGGCGACC ACCGGCGCCA CGGTGCTCGG CTGGGGCGCG
ACGCAGCTTC CCGAATGGGC CGAGCTGCTG ATCGGCGTCC CCGTCATCCT CGGCATCTAT
GGCTGGCTGA TCTGGACGCG CGGCTTCGGC CCCGCCGACC GCGAGCTGTT CAAGAAGCAC
CCGCCGGACA AGGTCGTGGC GGTTTGA
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| Protein sequence | MSQTDSAAAP LSPRASPQDA DTVALAKGGR TNFFGFILRL VARLPFLYVA GRWYGPEAVG
RFAFAVLVIE LVAQLATLGL KRGLAEQLSA PGADQRTVVW DGMFVAFLAS AAGSVLLLLL
PQLMYPAGNI NEIDRWMACL VFVIAGTDIA LAACAYKFDI GATVRARAIV EPWVISAAAA
GFWFVSAENG LMLSYAAAML GAFLTALIPM VRHFGGPGVW RPHPAQLITL ARRNAPLAAA
DAIEWGTRRL DLFILGQFTS PTIYGIYYMA QQVASLPQKL KTSFEPILGP VITRNLAEKR
LSAVAAQVSQ VGFWIIAAQA GVALALGIPG EAVMGLVGPE FVSGTAALAF LLAAEVVAAT
AVVSEAALVY VARHRNLLIS IATLALQAAL SVALILIAQS MGLPPIYYAA AVALALMIAL
GFASLVKARL LSHILGAPVN SLRWALVWAT TGATVLGWGA TQLPEWAELL IGVPVILGIY
GWLIWTRGFG PADRELFKKH PPDKVVAV
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