| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2865 |
|---|
| Symbol | |
|---|
| ID | 4080658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 3016583 |
|---|
| End bp | 3017839 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638011249 |
|---|
| Product | linalool 8-monooxygenase |
|---|
| Protein accession | YP_617903 |
|---|
| Protein GI | 103488342 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2124] Cytochrome P450 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.961693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.635546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCACCC AGATTCGCAT CGCCCCCGAA ACCGTCAATC CGCTCGACGT CAGCCGCGCC
GAGCTGTGGA GCGAGGATCG CTGGCAGGAA CCGATGCGCC AGTTGCGCGC CGAATCACCC
ATCTATTATT GCCCCGAATC GAAGTTCGGC CCCTATTGGT CGGTGACGAC GTACAAACCG
ATCCAGCATA TCGAGGCGCT GCCGAAGATT TTCTCCTCGA GCTGGGAATA TGGCGGCATC
ACCGTCGCCG GCGACGGGGT CGAGCATCTG AAAGAGGGCG AGATCCCGAT GCCGATGTTC
ATCGCGATGG ACCCGCCGCA GCACACCGCG CAGCGCCGCA CCGTCGCCCC CGCCTTCGGT
CCGTCGGAGA TCGAGCGGAT GCGCGCCGAC ACGCAGGCGC GCACCGCCGC GCTGATCGAC
ACCCTGCCCG TCGGCGAGGC GTTCGACTGG GTCGAGAAAG TGTCGATCGA GCTGACCACC
GACATGCTCG CGATCCTGTT CGACTTTCCC TGGGCCGACC GCCACAGGCT GACCGCCTGG
TCCGACGCGC TCGGCGACAT CGAAAGCTTC AACACGCTCG AAGAACGGCA GGCGCGGCTC
GCGACCGCCT TTGAAATGGG CGCGGCGTTC AAGGAGTTGT GGGACCACAA GGCCAGGAAT
CCGGGCAAGC ACGACCTCAT CTCGATCATG CTTCAGTCGG ATGCGATGAG CCATATGAGC
CATGAGGAGT TCATGGGGAA TCTCATTCTG CTGATCGTCG GCGGCAACGA CACGACGCGC
AACTCGATGT CGGCCTATGC CTATGGCCTG CACTGCTTTC CCGAGGAACG CGCCAAGCTG
GAGGCGAACC ACGATCCCGA ACTGGCGGTC AATGCGATGC ACGAGATCAT CCGCTGGCAG
ACGCCGCTCG CGCACATGCG CCGCACCGCG ATGGAGGACA CCGAACTGTT CGGCCACCAG
ATCAAGGCGC GCGACAAGAT CGCGCTCTGG TATGCCTCGG CGAACCGCGA CGAAAGCATC
TTTCCCGACG GCGACCGCAT CATCGTCGAC CGCGAAAATG CGCGCCGCCA CCTTGCCTTC
GGCTATGGCA TCCACCGCTG CGTCGGCGCG CGCGTCGCCG AACTGCAGCT TACGACGCTG
ATTTCGGAGA TGCAGAAGCG CCGCCTGCGC GTCAACGTCG TCGGCGAGCC CCAGCGCGTC
CATGCGTGCT TCGTCCATGG CTATCGACAC CTGCCGGTCG AACTCGAACG ATATTGA
|
|---|
| Protein sequence | MATQIRIAPE TVNPLDVSRA ELWSEDRWQE PMRQLRAESP IYYCPESKFG PYWSVTTYKP
IQHIEALPKI FSSSWEYGGI TVAGDGVEHL KEGEIPMPMF IAMDPPQHTA QRRTVAPAFG
PSEIERMRAD TQARTAALID TLPVGEAFDW VEKVSIELTT DMLAILFDFP WADRHRLTAW
SDALGDIESF NTLEERQARL ATAFEMGAAF KELWDHKARN PGKHDLISIM LQSDAMSHMS
HEEFMGNLIL LIVGGNDTTR NSMSAYAYGL HCFPEERAKL EANHDPELAV NAMHEIIRWQ
TPLAHMRRTA MEDTELFGHQ IKARDKIALW YASANRDESI FPDGDRIIVD RENARRHLAF
GYGIHRCVGA RVAELQLTTL ISEMQKRRLR VNVVGEPQRV HACFVHGYRH LPVELERY
|
|---|
| |