| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2637 |
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| Symbol | |
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| ID | 4081591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2773124 |
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| End bp | 2777710 |
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| Gene Length | 4587 bp |
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| Protein Length | 1528 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638011013 |
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| Product | helicase-like protein |
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| Protein accession | YP_617675 |
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| Protein GI | 103488114 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.209062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTGT CTAACCATGC CCTCGCGGTG CTCGACCGCA TCGAAGCCAT TGAGATGCGC
TCCCTCGAAT GGGGGTTCAC CGATGGCGCT CTGAGCGAGG ATGAAGCCTT CGATCTCGGC
GATCAGGTGT GCGCGGCGGC AGGAGTAAGT GGCACTGACG GGCAGGATCT CGTCGAGGAA
CTGATCGATG CCAAGCTAAT CTTCGAGATG GCGAGCGTCG GCGGCGACGT CCGTATCCGG
TCGCGCTTTG CCGAGATGAT GCGGCTGCTG GCTGCCAACC GACAGCTCTT CCCCAACAAG
CCGTGGCAGG GTGCGTCGTC CCTCGTCGCC GACTTTCGGG TGGACTGCCG GCCGCGGCTC
TTTCCCGAGC GACGGCGTTT GCCCGCCGAT ATCCTCACCG AGCATGCATC AGTGCTGGGC
GGGTCACAAC TGCGTGAGGA CCTCTGGCGG ACGCTGACCT CGCGCGACGG AATGAAGCTT
GCCGGCTTTC AGGAGCGCGC GGCGCTGCGT CTGTCGTCCG CGACGGACGA TGGCGGCACA
ATCGTCACCG CTGGCACCGG CAGTGGCAAG ACCATCGCCT TCTACCTGCC CGGAATGATC
CGCATTGGTG AAGCGATCGA TGCCGATCAT TGGGTCAAAG CGATCGCGAT CTACCCGCGA
ATTGAGCTGC TCAAGGACCA GTTTGCCGAA GCGTTTCGCA TGGCGCGGAC GATTGATCAG
ACGCTTGCCG CGCACGGGCG CCGGCCGCTG ATCATCGGTG CCTTGTTCGG CAAGACACCG
ACCCGTGCGA CCCGGCAGGA ACTGATCGAT AAGAGTTGGG TTCGGCGCGG CGAGGACTTT
GTCTGCCCCT GGATGCGCTG TCCGCGCTGC GACGACGAGC TCGTCTGGCG CGGCGTTGAT
ATCGCCGCGA CCACCGAGCG GCTGGCCTGT GTTCAACCCG CCTGCGGCCA AATGATCGGC
GACGACCAGA TCGTGCTGAC CCGGACCCGG TTACAGCGCA TTCCGCCCGA CATCCTGTTC
ACCACGACCG AGATTCTGAA CCAGCGCCTG TCCGATCACT GGATGCGCGG TCTGTTCGGC
GTCGGTCTCC CGCTCGGGCG CAAGCCATTG GTGGCCCTGC TCGACGAAGT GCACACCTAT
GAGGGTGGAG CCGGCGCGCA GGCCGCGCTG ACGCTCCGGC GATGGCGGCA TTTGCTGGCG
GCACCGATCT CCTGGGTCGG TCTCTCCGCC ACGCTAGGCG ATGCGGCGCG CTTCTTTTCT
GATCTGACCG GCGCGGCCTT GGATGACGTG GTCGAGATCA CGCCGACGCT CGAAGAGTTC
GAGGAACAGG GCGCCGAATA TCAAATCCTG CTACGTGGCG ACCCGGCGTC GCGCGCGTCG
CTGCTCTCGA CGACGATCCA GACCTCGATG CTGCTGCCCC GGCTGCTCGA TCCGCCCGGC
GCAACCAACG TGTCAGGCAC CTTTGGCCGG CGCGCCTTTC TTTTCACCGA TGACCTCGAC
GTCACCAATC GCCTCTACGA CGATCTGCGC GACGCCGAGG CATTCACGAT TTTCGGTCGA
CCCGATGCGG CGCGGATGCC CCTTGCGAAC ATCCGCCGGG CCGGTCCCGA TGCCGCGGTT
CGCGATGTCG AGGGCCAGCG CTGGCGGATC TGCGAGGACA TCGGCCATCC GCTCGATCGC
CGCCTGGTCG TCGGGCGGAC CACCTCACAG GACGCCGGAG TCAATCAATC GGCCAATATC
GTGGTTGCGA CTGCTGCGCT TGAGGTCGGG TTCAACGACC CGCTCGTCGG CGCGGTCATC
CAGCACAAGG CGCCGCGCAG CATGGCGTCG TTCCTGCAGC GCAAGGGACG CGCCGGCCGC
GATCGCGCGA TGCGCCCGAT CACGCTCACT GTCCTGTCGG ACTATGGCCG CGACCGCGCT
TTCTACCAGG CGTTCGAGCA TCTGTTCGAC CCCTCGCTCG AGCCGCAATA TCTCCCGATC
CGCAATCCGT ATGTGATGAA GATTCAGGCT GTCTTCGCGT TGTTCGATTG GCTGGCAGCG
ACCACCGTGG GCTATGAGAA GGCCTGGCAG TGGAACCTCC TAAGCCGCCC GTTGCCGCAG
GCGAGCCCCG CCGAGCGTGC CGTTCTCGAT CGCACCCGCG CTAAGCTGAC CCAGTTGGTG
CAAGGCGACG CCGCCACCAT CGACGATCTG CGCAGCTATC TGATGGGAGC GCTCGGGATC
GACCGACCGG CGGCCGAAAC ATTGCTCTGG GAAGCGCCGC GCTCGCTTCT GCTCGAGGCG
GTGCCGACGT TGGTCCGGCG GCTGTTCCGC GGCTGGCAAC TCGCGATCCC AAATGCCGGC
GCGACGCTTG ATCTGCAGGT CGATCACCAT CCGCTGCCCG ATTTCGTCCC GCGCAACCTG
TTCAGCGACC TGAGCTTGCC GGAAGTGCGG GTCATCATCC CGCCCGCGAC GGTCAATCAC
GAGGAACGAG TCGAACAGAT GCCGATCCTC CAGGCGCTGA ATCAATTCGC ACCGGGACGC
GTGACCCGCC GCTTCGCACA TGAGCGCGGC GCACTGTCGC ACTGGATTCC GGTCGATCCA
GCGTTTCCCG AGCAGGAACG CCGGATCAGC GACTACGCGC CCGAACATGA GTTCGTAGGC
AGCTTTACCG GCAGCCTCAA TGATCATGTC GGCGGAGCGC CGCTCCTGGT CTTCCGACCA
TGGACCGTGC GCCTCGAACG TGCCGCCCGC ACCGAGGCGC TGCCGAGCAG CAACGCCCAA
CTCGTCTGGC AATCTGATAT TGTCGCCAAT GGCGATGCCC TCGGCGTGCC GGTCCCGACG
CGGTCGGAAT GGCGCCACCA TGTCCGCGCC ATCGACTTCC ATCTGCACCG GTTCCGCTCG
AGCGTCAGTG TTCGGCGCTT CGCCGGGACG GCGCGGGCGA ATGTCCGAAC GTTACAGGAC
GATTTTCCCG TCACGCTGAC CTTCACCAGC AATGACAATC GACCCGCCGC GGTCGGCTTT
GAACTTGAGG TCGACGGATT CCGGCTCGAT CTCGCCTTGC CGCATGCCGA CATGCTGAAC
GGTGATCGCT TGCCGCCCGA TGTCCTCGCC GCAAGCAAAC TCGCCTATGT TCGCGACCTG
ATCCGGCTGG ACCCGGAACT GCCCGACGAC CTAAACCAGT TTCAGCGCGA ATGGTTGGTC
CAGTTCCTGT TGTCGGCATT GCTTGCCGAT GCTGCGACCA ACAATCGGCC ACTGGCGGAG
ACGATCGCCG ACCTTCTTAA CGACGACCGG ATCGAAAGCG TGTTCGGTGC TGTCATGGAC
GCTGTGTTCG GCGCGATGCC GCCGACGCCG CCCGACAGCG ACGATACGCA AGATGGCGAT
GCCGACGATG GTGCTGATGG TAATGGCGGG TATCCTGCTG GCGAAGTTGC TGGCGCCGGT
GCGGCAGCCG GTGGAGGGCG TTTGCAGCAG GCGCTGCTCC AGCAACTCGG CCGTCCGGTC
GTCCGGGATC GGTTGCGCGC GCTTGCCGCG CAACTGATCG CGGTCGATCC CGCGATGTTC
AGCGCCTGGC TTCGTCGCCT GATCCTCGAA ACGCTCGGCG AGGCGATGCT CCAGGCGTGC
ATCGCCGCGG CACCGCGACA GGCCACCGTT GACACCCTCC TCGTCGATAT CCGCGATGAC
GCGACGTCCG ATGTCGCAAG CGTCTGGATC AGCGAGACGA CACTTGGCGG CGCTGGTGTC
CTCGAAGCCT TCGCCGACCG TTTTGCCTCC GAACCGCGTC TGTTCTTCTC GGCGCTCAAC
GCGGCGCTTG CGCCCAGCGA CTTGGAGTTG GTCGATGGCA GCTTGCGTGA GATCCTGACC
CTCGCCATCG ACGATGTCGA GGTCAGCGAA CAGGTTACGC GACTGCGTGC GACGAACTCG
CACGGTGAGC GCGCGATCCT GTGGCGGACG CTCTCACACA CGCTCGCGCA GCGCGGTGGA
ATCGATCTGA GCCATGCGCT GTCGGTTTCG CTCAACAACC GCCTGCTGCG CGCCGGCTCG
GGTCCCCAAC TCGATCGGTT GTTGCTCGAC CTGCAAACGC ATTGGGATGC GACGCAGGAC
CGGTTCGGCA TTGCCATCGG CTTGCGCGAA TATGCCTATA TCGCGAGCCG CGACGCCACT
CTTTCGAGCG CCGTTCGAGC GTTCCTCGCG GCGACACTGC CAGCGGCGGC CATCGCGCAT
GTAACGGTCC TGTCGGCAAT CACGAGCTTG CTCTGGCCGC GCGCGAATGA AGTGCGCCAG
CGTGTCCTGC AGTCCTATCA TCCGTTCCGC CAGATGCGTT CGACGGACCC CGCTGTCGTC
CGCAATCTGC TGCTCAGCCG GGCGATCGCG ACGATCGACT TCAGCGATCC CGATTGGGAG
ACTCTGCTAG CAACCGCGTT TGAAGCCCAG GGTACGGCAC GGCTCGTTGC CGATGCGGGC
GAGGCCCGGC TGTTCCGCGC CGCCCTCGTT CGCCTCTCGG CGACCCCTGT CAGCGTCGGT
GTGCTTCAGT TCTTCCCCGC CACCGAGCGG GTCGAACGCG CCGATGGCAG AATTTTCGCG
ACGCTGACCC TGAGGGAGCA GGTCTGA
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| Protein sequence | MPVSNHALAV LDRIEAIEMR SLEWGFTDGA LSEDEAFDLG DQVCAAAGVS GTDGQDLVEE
LIDAKLIFEM ASVGGDVRIR SRFAEMMRLL AANRQLFPNK PWQGASSLVA DFRVDCRPRL
FPERRRLPAD ILTEHASVLG GSQLREDLWR TLTSRDGMKL AGFQERAALR LSSATDDGGT
IVTAGTGSGK TIAFYLPGMI RIGEAIDADH WVKAIAIYPR IELLKDQFAE AFRMARTIDQ
TLAAHGRRPL IIGALFGKTP TRATRQELID KSWVRRGEDF VCPWMRCPRC DDELVWRGVD
IAATTERLAC VQPACGQMIG DDQIVLTRTR LQRIPPDILF TTTEILNQRL SDHWMRGLFG
VGLPLGRKPL VALLDEVHTY EGGAGAQAAL TLRRWRHLLA APISWVGLSA TLGDAARFFS
DLTGAALDDV VEITPTLEEF EEQGAEYQIL LRGDPASRAS LLSTTIQTSM LLPRLLDPPG
ATNVSGTFGR RAFLFTDDLD VTNRLYDDLR DAEAFTIFGR PDAARMPLAN IRRAGPDAAV
RDVEGQRWRI CEDIGHPLDR RLVVGRTTSQ DAGVNQSANI VVATAALEVG FNDPLVGAVI
QHKAPRSMAS FLQRKGRAGR DRAMRPITLT VLSDYGRDRA FYQAFEHLFD PSLEPQYLPI
RNPYVMKIQA VFALFDWLAA TTVGYEKAWQ WNLLSRPLPQ ASPAERAVLD RTRAKLTQLV
QGDAATIDDL RSYLMGALGI DRPAAETLLW EAPRSLLLEA VPTLVRRLFR GWQLAIPNAG
ATLDLQVDHH PLPDFVPRNL FSDLSLPEVR VIIPPATVNH EERVEQMPIL QALNQFAPGR
VTRRFAHERG ALSHWIPVDP AFPEQERRIS DYAPEHEFVG SFTGSLNDHV GGAPLLVFRP
WTVRLERAAR TEALPSSNAQ LVWQSDIVAN GDALGVPVPT RSEWRHHVRA IDFHLHRFRS
SVSVRRFAGT ARANVRTLQD DFPVTLTFTS NDNRPAAVGF ELEVDGFRLD LALPHADMLN
GDRLPPDVLA ASKLAYVRDL IRLDPELPDD LNQFQREWLV QFLLSALLAD AATNNRPLAE
TIADLLNDDR IESVFGAVMD AVFGAMPPTP PDSDDTQDGD ADDGADGNGG YPAGEVAGAG
AAAGGGRLQQ ALLQQLGRPV VRDRLRALAA QLIAVDPAMF SAWLRRLILE TLGEAMLQAC
IAAAPRQATV DTLLVDIRDD ATSDVASVWI SETTLGGAGV LEAFADRFAS EPRLFFSALN
AALAPSDLEL VDGSLREILT LAIDDVEVSE QVTRLRATNS HGERAILWRT LSHTLAQRGG
IDLSHALSVS LNNRLLRAGS GPQLDRLLLD LQTHWDATQD RFGIAIGLRE YAYIASRDAT
LSSAVRAFLA ATLPAAAIAH VTVLSAITSL LWPRANEVRQ RVLQSYHPFR QMRSTDPAVV
RNLLLSRAIA TIDFSDPDWE TLLATAFEAQ GTARLVADAG EARLFRAALV RLSATPVSVG
VLQFFPATER VERADGRIFA TLTLREQV
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