| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2605 |
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| Symbol | |
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| ID | 4081658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2746924 |
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| End bp | 2748216 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010982 |
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| Product | conjugation TrbI-like protein |
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| Protein accession | YP_617644 |
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| Protein GI | 103488083 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGC CGGGAGGAGA AAGGGCTGAA GCTGGGGAGC CGGTCATCGG CCTGCCGCAG
AATCCCGCAG CCAGGCCGAA TGCCGGGGAG GAACCGGAAG CGGCGCCAAC TGCCGCTCCG
CCGCCCGTCC ATGACGGGCA GGCATTCCGG TTGCGCGGCG ATCCGCCGTC CGTCATGCGC
CTTTCGCGCA AGGCGCTTGC CTCTGTCGGT GCGGTTGCCT GCCTCAGCAT CGGCGGCGCG
CTCGTTTATG CGCTTCTGCC CGCGCGTCAT GCCGACGCAC CGAATCTCGT TGAAACCGAG
AGCCGGAACA AGGCGGACAA TGTGACTGCG GCGCCGGCCA GCTACGACAA GGTTCCCAAG
CTCGGTCAGC CGCTCCCGGG CGACCTCGGA CGCCCGATCC TCTCGGCGCA GCAAAATGGT
CAGCCCGTTG CCGTGCCGCC GATGGGGACG CCGGCTCCTC AATCCGTGGA CCCGCGCGTC
GCTGCAGCGG ACCAGGCCCG CCAGCGCATC ATGCAGGAGC GCGACACCGC GCGCACTAGC
GGGTTGTTCC TCGGCGAGGC AATGAGCGGC GCGCGCGCTT CGGCGGCGTC TGCCGAGCAG
GCTATGCCGC CCGCTTCAGT TGGCATTGCG GCCAATCCGG CTCCCGCGCC GACTGGCAAG
CGCGGCTTTA TGGCCGTCGT TGCCGACCGC TCCACCGCCA GCAATGAACG GGTCGCTCCG
CCGGTCTCAC CTTATATCGT GCAGGCCGGC AGCATCATCC CGGCCGCGTT GATCACGGGC
ATCCAGTCGG ATCTCCCTGG CCAGATCACC GCGCAGGTCA CGCAGAATGT CTATGACAGC
CCGACGGGAC GCATTCTTCT CGTGCCCCAG GGCTCGCGGC TGATCGGCGA ATATGACAGC
GAAGTCTCGG CGGGCCAAAG CCGAGTGCTG CTCGCCTGGG ATCGGCTTAT TCTTCCAGGT
GGCCGCTCGA TCCTGCTGGA CCGCCAGCCA GGTGCCGACG CGTCCGGTAT GGCAGGGATC
CGGGATCGCG TGAACTATCA TTGGGGCAGC ATGCTCAAAG CCGCGCTGGT CTCGACGTTG
CTGGGCGTCG GCACCGAGCT TGCAACCGAC AGCGACGACG CGCTGGTCGA GGCTTTGCGC
TACGGCACGC AGGACACGAT CAATCAAACG GGACGCCAGG TCGTGCAGCG CCAGCTCAGC
GTCCCACCGA CGCTCACCAT ACGCCCAGGC CATGTGCTTC GCGTCATCGT GACGCGCGAT
CTCGTACTCG AGCCGCTACG GAAGGAACAG TGA
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| Protein sequence | MSGPGGERAE AGEPVIGLPQ NPAARPNAGE EPEAAPTAAP PPVHDGQAFR LRGDPPSVMR
LSRKALASVG AVACLSIGGA LVYALLPARH ADAPNLVETE SRNKADNVTA APASYDKVPK
LGQPLPGDLG RPILSAQQNG QPVAVPPMGT PAPQSVDPRV AAADQARQRI MQERDTARTS
GLFLGEAMSG ARASAASAEQ AMPPASVGIA ANPAPAPTGK RGFMAVVADR STASNERVAP
PVSPYIVQAG SIIPAALITG IQSDLPGQIT AQVTQNVYDS PTGRILLVPQ GSRLIGEYDS
EVSAGQSRVL LAWDRLILPG GRSILLDRQP GADASGMAGI RDRVNYHWGS MLKAALVSTL
LGVGTELATD SDDALVEALR YGTQDTINQT GRQVVQRQLS VPPTLTIRPG HVLRVIVTRD
LVLEPLRKEQ
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