| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2600 |
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| Symbol | |
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| ID | 4081653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2739135 |
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| End bp | 2741705 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638010977 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_617639 |
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| Protein GI | 103488078 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAGA AACGGTTTCA CGAGCTTGCG GCGCTGCTCG CGGGTGCCGC GATGGCGGCG
TTGCCGATGC CGGCGCTGGC GCAGAGCGAT CAGACTTATC AGTTCGACCT CCAGGCCCAG
GATCTGGGCG ATGCGCTGCG CAGCGTCGCG GCCAAAGCAG GTTGGGAGCT TTATGCGTCG
GCCGAGGATG TGAACGGCGT TCCCGCGCCC AGGCTCGAAG GCGAGCTCAC CGCCCGGCAG
GCGATCGAGC GCTTGCTGGC CGACACGAAC CTGCGTGCTC GCTTCCGCGA TGGAGCCGTG
ATCATCCGGG GGCGAACGGC AGCGATAGTG ACGGCGGGCG ATGAGGCGGC CGACAGCGAG
ATCGTCGTGA CGGGCAGCCT CATACGTGGT GCCGACATCC CCTCCGCCAG AATTACCGTA
TCCCGGTCGG ACATCGAAAA TGCCGGACAG TCGGATCTGG GCGAGGTGGT TCGCAATATC
CCCCAGAACT TCAGTGGTGG CCAGAACCCT GGCGTCGGCT TTGGTGCCGG GCAACTCAAC
TCCAACCTCA ATTCAGCGTC GCATCTCAAC CTGCGTGGTC TTGGTTCCGA TGCGACGCTG
ACGCTGCTGA ACGGCCATCG GCTCCCTTAT GATGGCGCGT TCGGGGGCGT CGATATTTCC
GCCATACCGG TCGAAGCCGT CGAGCGGATC GAGATCGTGC CCGATGGTTC TTCCGCGCAA
TATGGGTCGG ACGCGGTGGC AGGCGTCGCC AATATCATAC TTCGGAGAGA TTTTACGGGA
TTGAAGACCT CGGCACGGAT CGGAGGTTCG ACCGATGGCG GCAACTTCCA GCAAGGTGCC
GATGTCGTCG GCGGTACGAG CTGGACTTCC GGCAACTTGA TCGCCGCCTA TCACTTCGCG
CACAATTCAG CGATCTATGC GCGGCAACGC AGCTATACGG ACGCGCTGGC GCCGGGAAAC
TCCCTCTACC CCTCGATCCG CCAGCATGCC GTGACGATGT CCGGTCGCCA GACGCTGGCG
CCGGGAATCG AGTTCAAGGT TGACGGCCTC TACAGCAACC GGCGTTCGAT TATTACCTCG
GGCAGCTTGG GGAACGCTGG TCTTACCGAG TCCCGATACG CTCCAACGAC GAAGGCCTTC
TCCATCATCC CGGCCATCGA TGTGGACCTG GGCGGCCAAT GGATGGCGAA AGCCTCGCTC
GCCTATGGCA AGGACAACAG TCGCTACAAC AGGTTGTTCA GCCAGCCGGG CATTGCGGGC
ACGGTAACGT CCGGCTGTTA CTGTAACACC ACCTTGACCA CTGAGCTGGT GATCGACGGA
CCGCTCGTCT CCTTGCCTGC GGGAGATCTG CGTGTGGCGA TCGGTGGAGG ATATCGCTCC
AGCAGCCTGC GCTATTCGCG TTACGAAAAT GAAGGTCTTG TCGCTGCGTT CGACGCTAGC
CGGAAAAGCC ACTATCTCTT TGGAGAAGTC CAGCTTCCGG TAATCGCTCC CGAGCAAAGT
GTGCCGCTGG TCCGCCGGCT CACAATCACC GCCGCGGCTC GCTATGAAAA CTATCCGGGC
ATGGCGAGCG TCACGACGCC GAAGCTTGGT GCTGTCCTTG AACCCAATCG CGACCTCACG
ATCAAGGCCT CGTGGGGCCG ATCGTTCAAG GCGCCCACGC TCTATCAGCA ACATGTCGGC
TACGAGGCCT ATCTTCTCCC CGCCAACTGG TATGTTCCAG CCGCCTCAGG CACGATCTTC
TATGCAAGCG GCGGAAACCC AGACCTGGAA CCCGAACGCG CGCGCAGTTG GTCGGCGGGG
TTCGAATTTC ATCCTCAAGC GCTCGAAGGG TTTCACGTCG GCGCGAGCTA TTTCAACGTG
CGCTATCGGG ATCGCGTCGC CAGACCAATC GCCGGATCGA TCGCATCCGC GTTCAGTCAG
CCGGGCTATG CCAGTTTGTT GAACTATGCG CCTTCTACGG AGCTGCTCGA CAGACTTGCG
GCGGGTTCGC TTTATGGCTT GACCAACTAT ACCGCTGGTC CGTTCGATCC AGCAAACGTG
CTCGTCCTCG TGGACAACCG CAACCTCAAT CTTGCGCGAC AGGACATTGA GGGCGTCGAC
ATAAACACCA GCGTTCGTTT CTCCATCAGC CCGGATCAAA ATATCGGGCT GACCGGATCG
GCGACGTATC TCAAAAGCGA CCAGCAACTC ACGCCGCTCC TGCCACGCAC ACAGCTTGCG
GGCGTGATCT TCAATCCGCC CCATTGGCGC GGACGCCTCG GTGCCAGTTG GGAAGCGCGG
CGCTTCAACG TATCGATGTT CGCCAACTAT ACGGGCAGCG TCACGGACAA TCGCTACCTC
CCGTCAAGTT CGGTCGATTC CATCCTGACC TTCGACCTCG CGGCCAGGTT GGACATTGGA
AACTCTTCGT CCCGGTCGCC AGCGCTGACA ATCACGATCG TTGCCAATAA TATGTTCAAT
GCAAAGCCCG ACATCATTCG GGTAACCGGC TCAACAGACA CGCCCTACGA TTCAACGAAT
TATTCGGCGA CCGGTCGCTT TCTCGGATTG ACCGTATCCC GGAGCTGGTG A
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| Protein sequence | MAEKRFHELA ALLAGAAMAA LPMPALAQSD QTYQFDLQAQ DLGDALRSVA AKAGWELYAS
AEDVNGVPAP RLEGELTARQ AIERLLADTN LRARFRDGAV IIRGRTAAIV TAGDEAADSE
IVVTGSLIRG ADIPSARITV SRSDIENAGQ SDLGEVVRNI PQNFSGGQNP GVGFGAGQLN
SNLNSASHLN LRGLGSDATL TLLNGHRLPY DGAFGGVDIS AIPVEAVERI EIVPDGSSAQ
YGSDAVAGVA NIILRRDFTG LKTSARIGGS TDGGNFQQGA DVVGGTSWTS GNLIAAYHFA
HNSAIYARQR SYTDALAPGN SLYPSIRQHA VTMSGRQTLA PGIEFKVDGL YSNRRSIITS
GSLGNAGLTE SRYAPTTKAF SIIPAIDVDL GGQWMAKASL AYGKDNSRYN RLFSQPGIAG
TVTSGCYCNT TLTTELVIDG PLVSLPAGDL RVAIGGGYRS SSLRYSRYEN EGLVAAFDAS
RKSHYLFGEV QLPVIAPEQS VPLVRRLTIT AAARYENYPG MASVTTPKLG AVLEPNRDLT
IKASWGRSFK APTLYQQHVG YEAYLLPANW YVPAASGTIF YASGGNPDLE PERARSWSAG
FEFHPQALEG FHVGASYFNV RYRDRVARPI AGSIASAFSQ PGYASLLNYA PSTELLDRLA
AGSLYGLTNY TAGPFDPANV LVLVDNRNLN LARQDIEGVD INTSVRFSIS PDQNIGLTGS
ATYLKSDQQL TPLLPRTQLA GVIFNPPHWR GRLGASWEAR RFNVSMFANY TGSVTDNRYL
PSSSVDSILT FDLAARLDIG NSSSRSPALT ITIVANNMFN AKPDIIRVTG STDTPYDSTN
YSATGRFLGL TVSRSW
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