| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2591 |
|---|
| Symbol | |
|---|
| ID | 4081644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2733473 |
|---|
| End bp | 2734087 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638010968 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_617630 |
|---|
| Protein GI | 103488069 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCG CCTATGTTCT CGAGCCGACC TACGATACGC TGAGGCGGCG GCTGTTCGCC
GGCGTCTGGC CGTCGGGGCA GCGCCTTGAA GCCGCCCGGC TCGCTGCTGA GCTTGGCGTC
AGCATGACGC CCGTGCGCGA CAGTCTCAAT CGGCTTGCGG GCGAACGTCT GGTTCACTCG
TCGCCCGGCG AAGGATTCCA GGTTCCCCTG CTCAGCGAAA CCGAGCTTCG GGGACTTATA
GACTGGCATC GCGCTCTCAT AGACGTTGCA CTTGGACCCC GGGGGACAAT CGCGATGCCC
ACGGAATTAC CGCAAGGCCA TGACGGTATC GGCGAGCGCA CGGCGATCCT GTTTACGGCA
ATCGCAAGTA CGGCACAAAG CCTCGAGCTT CACTGGGCTC TCGGCAATGC CGCTGCGCGC
CTCGGCTGTT ATCGGCGACA TGAGGAAACC GTGCTCGATG ACGCGCATTC GGAACTGGCC
GCTCTTGAAG CGCTTGTGCG CGTGGGAAAG CGCGATGGGC TGGTGCGGGC AATCGAGCGG
TATCATGACC GCCGCCGCAC CGTTGCCGGT GATCTGGTGC ATGCTGCCCG CTATGCCGGA
TCCTCTGATG CGTGA
|
|---|
| Protein sequence | MSPAYVLEPT YDTLRRRLFA GVWPSGQRLE AARLAAELGV SMTPVRDSLN RLAGERLVHS
SPGEGFQVPL LSETELRGLI DWHRALIDVA LGPRGTIAMP TELPQGHDGI GERTAILFTA
IASTAQSLEL HWALGNAAAR LGCYRRHEET VLDDAHSELA ALEALVRVGK RDGLVRAIER
YHDRRRTVAG DLVHAARYAG SSDA
|
|---|
| |