Gene Sala_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2556 
Symbol 
ID4081471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2696453 
End bp2697739 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content62% 
IMG OID638010933 
Productfatty acid alpha hydroxylase, cytochrome P450 
Protein accessionYP_617595 
Protein GI103488034 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGGA TTCCGCGTGA CAAAAGCCTG GACTCGACGA TCGCCCTGAT GGGTGATCCC 
TACAGATTTA TTTCGAACCG GTGTCGACGC TACCGATCGG ACCTGTTCGA AACGCGGCTT
CTGCTGCGGA AGACCATCTG TATGACGGGG CCTGAAGCGG CCCGGCTGTT CTACGACCAG
AGCCGCTTCG CGCGCCACGG CGCCATGCCT AAGGCGATTC AGAAGACACT GCTCGGAGTG
GGTGGCGTAC AGGGCCTCGA CGAGGGAGCT CACCGGCACC GCAAGCAGAT GTTCATGTCG
CTGATGACAC CCGAGGGGAT TGAAAAGCTC GTGCGGCTGA CCTCGGCGGA GTGGCAGATC
CGCGTGCGCA AATGGGCGTC AATGAACGCG GTCGTGCTCT ATCCGGAGCT TCACGCGCTT
CTTACGCGCG CGGCATGCGC TTGGGCCGGC GTGCCGCTGG CGGATTCAGA GGTCGAGCCG
CGAACCCGGC AGGTCACCGC ACTGTTTGAC CATGCGGGTT CGATTGGACT TAGGCATCTC
TGGTCGCGGA GGGCCCGGAA ACGGGCCGAC AGCTGGGCGG CGGATATTGT CGAACAGATC
CGAAGCGGTC GCCTCCGCGC GCCCGAACAC TCGGCCGCCC ACGTCGTTGC GTGGCATCGG
GATTTCAGTG GTGCGCTGCT GACCCCCCAA GTGGCTGCTG TCGAACTGAT CAATGTGATC
AGACCGACGG TTGCCGTCTC GGTCTACATG ATCTTTGTCG CACATGCACT GCACACACAT
CCCCAAGTTC GAGAGAAGCT TCAGGCAGGC GACGAGGACT ATGCTGAATG CTTCGTCCAG
GAGGTTCGCC GGTACTATCC TTTCTTCCCG GCAGTCGCTG CACAGACGCG GCTGGCTTTT
GAATGGAACG GATACCAATT CCCCGCAGGT CGCCGAATTC TCCTCGATCT GTACGGTACA
AACCAGGATC CCCGAACCTG GGAAAGGCCG GAGGACTTCG AGCCCGAGCG GTTCGGTCGA
CGGGATGGCA GCCCGTTCAA TTTCATCCCG CAGGGTGGCG GCGACCACTA CTTCGATCAT
CGCTGTCCTG GCGAATGGAT CGCGATCGAG CTCATGAAGC TGACTGCGGA TTTCCTCACG
CGACGCATGA GCTACGAGGT GCCGGGACAA GACCTGAGGA TCGAATGGTC GCGGCTGCCC
GCGCTGCCGC GAAGCCGCTT CGTGCTCAGT AATGTTAGAG AATGCCAAGA ACTGCACCTT
CAGCGGACGC GCTGGCGCCG CCGGTGA
 
Protein sequence
MSRIPRDKSL DSTIALMGDP YRFISNRCRR YRSDLFETRL LLRKTICMTG PEAARLFYDQ 
SRFARHGAMP KAIQKTLLGV GGVQGLDEGA HRHRKQMFMS LMTPEGIEKL VRLTSAEWQI
RVRKWASMNA VVLYPELHAL LTRAACAWAG VPLADSEVEP RTRQVTALFD HAGSIGLRHL
WSRRARKRAD SWAADIVEQI RSGRLRAPEH SAAHVVAWHR DFSGALLTPQ VAAVELINVI
RPTVAVSVYM IFVAHALHTH PQVREKLQAG DEDYAECFVQ EVRRYYPFFP AVAAQTRLAF
EWNGYQFPAG RRILLDLYGT NQDPRTWERP EDFEPERFGR RDGSPFNFIP QGGGDHYFDH
RCPGEWIAIE LMKLTADFLT RRMSYEVPGQ DLRIEWSRLP ALPRSRFVLS NVRECQELHL
QRTRWRRR