| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2550 |
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| Symbol | |
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| ID | 4081465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2688690 |
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| End bp | 2691833 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638010927 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_617589 |
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| Protein GI | 103488028 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.750026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGC GGCTCATCCA TTGGTCGGTC CAGAACCGCT TCTTCATATT GCTGGGCGCG
CTGGCCTTGG TGTTCGCGGG GCTCTGGGCG GTGCGAACGA CACCCATCGA CGCGCTGCCC
GACCTGTCGG ATACGCAGGT CATCATCCGG ACCAGCTATC CGGGCCAGGC GCCGCGGATC
GTCGAGGATC AGGTCACCTA TCCGCTGACC ACCACCATGC TCTCGGTGCC GGGCGCGAAG
ACGGTGCGAG GTTACAGCTT CTTCGGCGAC AGTTTCGTCT ATGTGATCTT CGAGGATGGA
ACCGATCTCT ATTGGGCGCG CTCGCGCGTG CTCGAATATC TCAATCAGGT GCAGGGACGG
CTCCCCGAGA CCGCGCGGAG CGCGATCGGG CCGGATGCCA CCGGCGTCGG CTGGATCTAT
GAATATGCGC TGGTCGACCG GACGGGAGGC CACGACCTTT CGCAGCTCCG AAGCCTGCAG
GACTGGTTCC TTCGCTATGA GCTGAAGACC ATTCCGGGTG TCGCCGAGGT TGCGAGTGTC
GGCGGCATGG TCAGGCAGTA TCAGGTCGTC CTCGATCCGG TCAGGCTTGC CGCTTACGGC
GTCACCCACG CCCAGGCGGT CGAAGCGATC CGCCGCGCCA ATCAGGAAGC GGGCGGCTCG
GTGCTCGAGT TGGCCGAGGC CGAATATATG GTTCGCGCCT CGGGCTATCT CAGATCGCTC
GCCGATTTCC GCGCTATCCC GCTGCGCACC GCGTCGGGCG GCATCCCCGT TACCTTAGGC
GATGTCGCAA CAATCCAGCT CGGCCCTGAG ATGCGGCGCG GCATTGCCGA CCTCAATGGC
GAGGGCGAAG TGGCGGGCGG CATCATCGTG CTGCGTCAGG GCGCCGACGC CCGAAGCGCC
ATCATGGCGG TCGAGGCAAA GCTCGCCGAA CTCAAGAAGG GCCTGCCCAA AGGCGTCGAA
GTCGTCACCA CCTATGACCG TTCGCAGCTC ATCGACCATG CGGTCGAGAA TCTGACGCAC
AAGCTCATCG AGGAATTCAT CGTCGTCGCG CTCGTCTGCG CGCTGTTCCT CTGGCACGTC
CGCTCGGCGC TGGTCGCGAT CGTCACCCTG CCGCTGGGCG TGCTCGCTGC CTTCGTCGTG
ATGCGGCTGC AGGGGATCAA TGCGAACATC ATGTCGCTGG GCGGCATTGC CATCGCCATC
GGTGCGATGG TCGATGCCGC GATCGTGATG ATCGAAAATG CCCATAAGAA GATCGAGCGC
TGGGAGCACG ATCATCCGGG CGAAGAGCTT CACGGCACGA AGCGATGGAT AACCATCACC
GAGGCCGCGA TGGAGGTCGG CCCGGCGCTG TTCTTCTCGC TGCTGATCAT CACGCTGTCC
TTCGTGCCGG TGTTCACGCT CCAAGCGCAG GAGGGGCGGC TGTTCGCGCC GCTAGCCTTC
ACCAAGACCT ATGCGATGGC GGGTGCGGCG ATCCTGTCGG TGACGCTGGT GCCGGTGCTG
ATGGGCTGGC TGATCCGGGG CAAGATCCCC TCCGAACAGG CCAATCCGAT CAACCGGGGG
CTGACCCGCG CCTATCGGCC GGCCATCGAC TGGGTGCTGG CGCGCCCCAA GGCGACGCTG
ATCATCGCCG CGCTCGTATT TGCGACCACC GCCTGGCCGG TGGCGCGGCT TGGTGGGGAG
TTCCTGCCGC CGATGGACGA AGGCGACCTG CTCTACATGC CCTCGGCGCT GCCCGGCCTG
TCCGCAGCCA AGGCCTCCGA GCTGCTTCAG CAGACCGACC GGATGATCAA GAGGGTACCT
GAGGTCGAAA GCGTGTTCGG CAAGGCGGGC CGCGCCGAGA CCGCGACCGA TCCCGCCCCG
CTCGAAATGT TCGAGACGAC GATCCACTTC AAGCCCAGGG ATCAATGGCG CCCCGGCATG
ACACCCGAAA AGCTGGTGGA GGAGCTTGAC GCCAAAGTGA AGGTGCCCGG CCTTGCCAAC
ATCTGGATTC CGCCGATCCG CAACCGGATC GACATGCTGG CGACCGGCAT CAAGAGCCCG
ATCGGGGTGA AGGTCTCGGG GTCTGATCTG GCCGAGCTCG ATCGCATTGC CCATGATGTT
GAAACAGCGG CGAAGGCTGT CCCTGGCGTC AGCTCGGCGC TGGCCGAGCG GCTGACCGGC
GGACGCTATG TCGATGTCGA GATCGACCGC TTGGCGGCCG CGCGCTTTGG ACTCAACATC
GCCGACGTGC AGGAAATCGT CGCCGGCGCG ATCGGCGGTG AAAATGTGGG CCAGACGGTT
GAAGGGCTGG CCCGCTATCC GATCAATGTC CGCTACCCGC GCGAGATCCG TGACAGCCTC
GAGAATTTGC AGGCGTTGCC GATCCTCACG CGCTCGGGGC AGCAGATCAC GCTGGGTACG
GTCGCGCTGC TGCGTATCAG CGACGGCCCA CCGATGCTCA AGACGGAGAA CGGCAGGCTA
TCGACCTGGG TCTATGTCGA TGTGCGCGGG CGCGACCTTG CCTCGGTGGT CGGCGACATC
CAGACCGCCA TTGCCGGCCA GGTGAAGCTC TCGCCCGGGG TCTCGATCGC CTATTCGGGC
CAGTTCGAAT ATCTGACACG CGCCATCGAT CGGTTGAAGC TGGTCATCCC CGCGACGCTC
GTAATCATCT TCGTGCTCTT GTTCCTGATC TTCGGGCGGT TCGATGAGGC GCTGCTGATC
ATGGCCACCT TGCCCTTCGC GCTGACGGGC GGGTTCTGGC TGCTCTATCT GCTCGGCTAT
CACCAATCGG TTGCTACGGG CGTCGGGTTC ATCGCGCTGG CGGGCGTCGC TGCGGAATTC
GGTGTGGTGA TGCTGATCTA TTTGAAGAGC ACGCTCGAGG ATCGCGGACC CGATCCGGAT
ATGGCCCAGG TCGAGTCCGC AGTGCGCGAG GGCGCGCTGT TGCGGGTGCG GCCCAAGGCG
ATGACGGTGG CGGTGATCAT CGCCGGTCTT CTGCCGGCCC TTGTCGGCGG CGGCGCCGGT
TCGGAGGTGA TGAGCCGCAT CGCCGCGCCG ATGGTCGGCG GCATGCTCAC CGCGCCGCTT
CTGTCCATGT TCGTGATCCC GGCGGCCTAT CTTCTCATGC GACAGCGGAA AGCAAAACCC
AATCCGCAAC CCGATCAACC CTGA
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| Protein sequence | MIARLIHWSV QNRFFILLGA LALVFAGLWA VRTTPIDALP DLSDTQVIIR TSYPGQAPRI
VEDQVTYPLT TTMLSVPGAK TVRGYSFFGD SFVYVIFEDG TDLYWARSRV LEYLNQVQGR
LPETARSAIG PDATGVGWIY EYALVDRTGG HDLSQLRSLQ DWFLRYELKT IPGVAEVASV
GGMVRQYQVV LDPVRLAAYG VTHAQAVEAI RRANQEAGGS VLELAEAEYM VRASGYLRSL
ADFRAIPLRT ASGGIPVTLG DVATIQLGPE MRRGIADLNG EGEVAGGIIV LRQGADARSA
IMAVEAKLAE LKKGLPKGVE VVTTYDRSQL IDHAVENLTH KLIEEFIVVA LVCALFLWHV
RSALVAIVTL PLGVLAAFVV MRLQGINANI MSLGGIAIAI GAMVDAAIVM IENAHKKIER
WEHDHPGEEL HGTKRWITIT EAAMEVGPAL FFSLLIITLS FVPVFTLQAQ EGRLFAPLAF
TKTYAMAGAA ILSVTLVPVL MGWLIRGKIP SEQANPINRG LTRAYRPAID WVLARPKATL
IIAALVFATT AWPVARLGGE FLPPMDEGDL LYMPSALPGL SAAKASELLQ QTDRMIKRVP
EVESVFGKAG RAETATDPAP LEMFETTIHF KPRDQWRPGM TPEKLVEELD AKVKVPGLAN
IWIPPIRNRI DMLATGIKSP IGVKVSGSDL AELDRIAHDV ETAAKAVPGV SSALAERLTG
GRYVDVEIDR LAAARFGLNI ADVQEIVAGA IGGENVGQTV EGLARYPINV RYPREIRDSL
ENLQALPILT RSGQQITLGT VALLRISDGP PMLKTENGRL STWVYVDVRG RDLASVVGDI
QTAIAGQVKL SPGVSIAYSG QFEYLTRAID RLKLVIPATL VIIFVLLFLI FGRFDEALLI
MATLPFALTG GFWLLYLLGY HQSVATGVGF IALAGVAAEF GVVMLIYLKS TLEDRGPDPD
MAQVESAVRE GALLRVRPKA MTVAVIIAGL LPALVGGGAG SEVMSRIAAP MVGGMLTAPL
LSMFVIPAAY LLMRQRKAKP NPQPDQP
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