Gene Sala_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2425 
Symbol 
ID4081131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2562700 
End bp2563083 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content60% 
IMG OID638010804 
Productcopper resistance protein CopC 
Protein accessionYP_617466 
Protein GI103487905 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGT CTCTTCTCCC CTCTGCAGCG GCGGCTTTCG CTCTGCTTCT CATGCCGGCC 
ACGGCAAGCG CGCACACCAA GCTCGTCAGC TCGACGCCCG CCGCCAATTC GACCGTTTCG
AAGGTCACGT CGGTCAATCT TCAGTTCAAC GAAAAGATCG TCGCCTCGAC CCTCAAGACC
GAGCTGGTCA TGACCGGCAT GCCCGGCATG GCCAATCATG CCCCGATGAA GGTGCCTTAC
TCGTCGATGA TGGGCAAAGA GGGCAAGTCG GCGATGCTGA TGCTCAAGCG GCCGCTGACA
GCCGGAACCT ACAAGGTCAC ATGGTCGGCG GCGGGCGCTG ATACCCACCG CATGGGCAGC
GAATTCAGCT TCACCGTAAA GTAA
 
Protein sequence
MFKSLLPSAA AAFALLLMPA TASAHTKLVS STPAANSTVS KVTSVNLQFN EKIVASTLKT 
ELVMTGMPGM ANHAPMKVPY SSMMGKEGKS AMLMLKRPLT AGTYKVTWSA AGADTHRMGS
EFSFTVK