Gene Sala_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2420 
Symbol 
ID4080858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2557624 
End bp2558067 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content57% 
IMG OID638010799 
Producthypothetical protein 
Protein accessionYP_617461 
Protein GI103487900 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.692364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCAG CCTATCGCAG CCTCGCGCTG CAGACGATCG TCAGCGGCGT CATCATGTAT 
CTGGTGATGT TCGTCATGAT CGACCGCCTC TCGAGCTTCT ACAATAATCT CAACATGCTC
TACATGACGC TGATGATGGT CTCGCCGATG GTCGTGCTGA TGATCGTCGC AATGCCGGGC
ATGTTCCCGT CGAAACGTCT CAATACGTTC CTGCTGCTGG GATCGGCAGT TGCCTTCTTC
GGGAGCTTCG GGCTCATCCG GACACAGACG ACGATCGGCG ACACGGCCTT CTTGCGTTCG
ATGATCCCGC ATCACTCGGG CGCGATCCTC ATGTGTGAAC AGGCTTCTCT CAAAGATGCC
GAGATACGCG AACTCTGCCG CGGCATCATC GCGGGGCAGG CGGCCGAAAT CGAACAGATG
AAATCCATTC TCGCGAGGAA ATGA
 
Protein sequence
MKPAYRSLAL QTIVSGVIMY LVMFVMIDRL SSFYNNLNML YMTLMMVSPM VVLMIVAMPG 
MFPSKRLNTF LLLGSAVAFF GSFGLIRTQT TIGDTAFLRS MIPHHSGAIL MCEQASLKDA
EIRELCRGII AGQAAEIEQM KSILARK