| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2413 |
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| Symbol | |
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| ID | 4080851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2548517 |
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| End bp | 2549764 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010792 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_617454 |
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| Protein GI | 103487893 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.190027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGATA ATCATGACGG AAAATGGCTC GAGGAGCCGG CGAGCCCGAA AGGGCACGCT
TGGCAGGATC CGACGCGTGC CGTGCACGGC GGTCCCCGCC CGCGCGATCA GCGGGGCCTC
ATCAATCCGC CCGTCGATCG AGCCTCGACC ATTATCTACG ACAGCGTCGA GGCCTATATG
GACCGGCACC AGGGTCTCTA CGATGAGGTC ATCTATGGCC TGTACGGAAC GCGAACGACC
TTTGCGCTCG CCGAGGCTGT CAGCGAACTT GAAGGCGGCT GCAACACCGT CATCACCTCG
TCCGGAACCA GCGCGATCGC GCTGGCCCTC ACGGCTTTCG TGGCCGGGGG CGATCATCTG
CTCGTTGCGG ATTGCGTCTA TGGGCCGACC CGCAAGTTTC TGACCGACGT TCTCGCGCGT
TTCGGGGTCG AGGTGGAATA TTTCCGGCCC GATATCGGAG CGGAGATTGC CGGGCTGTGC
CGCAGCAACA CCCGGCTCAT CTATATGGAG ACCCCGGGCT CGCAGACATT CGATATGATC
GACGTCCCCG CGATCACGGC CGTTGCACGC AGCCGGGGCA TATTGACCGC TCTCGACAAC
ACCTGGGCGA CGCCGCTTTT CTTCAAGCCC TTGGCCCACG GGGTCGACAT CTCGCTTGCT
TCGGCAACCA AATATCTCTC GGGGCACTCC GACTGTCTGC TCGGCACGAT GACGGCCGCC
AGTGATGCCG TCTACCGCCA GCTCAAGGAC GCGGCGGCGC GCTGGGGCAA CTGCGCGAGT
CCCGACAATT GCTATCTGGT CCACCGGGGC ATCAGGACGC TCGATGCGCG CCTTGAACGC
CACCAGCGTA CCGCGGCGAC GCTGATCGAA TGGTTCGCCC AGCAACCCGA AGTGGTTGCG
GTCCGCTATC CGGCTCATCC CGCCGACCCC GGCCATGCGA TCTGGAAGCG GGATTTCACC
GGTGCGTCCG GATTGTTCGG TGTTCAGCTC GACGGTCTTA CCCCGCCCCA AACTAGCGCC
TTTTTCAACG AATTCTCGTT ATTCCAGCTG GGTTCGAGCT GGGGCGGCTT CGAAAGTCTC
GCGGTTCCGG CGTGGCCCGC TCCGATCCGC GATTTTCCGA ATGGCGAGGC AGATGGGGCG
CTGATCCGCA TTCACGCCGG ACTCGAAGCG CCGCAGGATC TGATCGCCGA CCTCGCCGCA
GCCTTCGCGC GGGTACGAGC GCTACGCGGC CGGGGGCAGG CGTCATGA
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| Protein sequence | MQDNHDGKWL EEPASPKGHA WQDPTRAVHG GPRPRDQRGL INPPVDRAST IIYDSVEAYM
DRHQGLYDEV IYGLYGTRTT FALAEAVSEL EGGCNTVITS SGTSAIALAL TAFVAGGDHL
LVADCVYGPT RKFLTDVLAR FGVEVEYFRP DIGAEIAGLC RSNTRLIYME TPGSQTFDMI
DVPAITAVAR SRGILTALDN TWATPLFFKP LAHGVDISLA SATKYLSGHS DCLLGTMTAA
SDAVYRQLKD AAARWGNCAS PDNCYLVHRG IRTLDARLER HQRTAATLIE WFAQQPEVVA
VRYPAHPADP GHAIWKRDFT GASGLFGVQL DGLTPPQTSA FFNEFSLFQL GSSWGGFESL
AVPAWPAPIR DFPNGEADGA LIRIHAGLEA PQDLIADLAA AFARVRALRG RGQAS
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