| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2411 |
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| Symbol | |
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| ID | 4080849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2544777 |
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| End bp | 2547482 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638010790 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_617452 |
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| Protein GI | 103487891 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.135227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.143367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCA GGACAATTTT GCTCGCCAGC GCCGCAGCGG TCGCCACTTT TGCAACACCC
GCGCTCGCGC AGAGCGGTGC CGCGACGCAG TCACCCGCCG CCGAGGATGC TCCGAACGGA
TCGGACATCG TCGTGACCGG CTCGCGCATC CGCCGCCAGG ACCTCGCAGG CGTCGGCCCG
GCGACCGTCG TGTCGGCCGA GCAGATCGAG AACACCGGCG TCGTCAATAT CGAGACGGTG
CTGCAGCGCT TGCCGGCCAA CGCCGGTTTC GCGGGCAACC AGACGTCGGC CTATTGGGCG
AACAATGGAT ATGGCACGGC GCAGGTGAAC CTGCGCGGTC TCGGCATCAA GCGCACCCTC
GTCCTGCTCA ACGGCCGCCG CCTCGTCGCG GGCGGCACCG GGGCGAACTC CTCGCCCGAC
CTCAACATGA TTCCCGTCGC GGCGCTCGCA CGCACCGATG TGCTCAAGGA CGGCGCCTCG
GCAATCTATG GCGCCGACGC GATGGCGGGT GTCGTCAACC TTGTAACGCG CACCGACTAT
GAAGGTCTCG GCCTCAGCGT GCGCCAAGGC ATCACCGAAA AGGGCGATGG CTCGGACTTC
ACCGCCGACC TCCTGTGGGG CGTCCGCAAC GATCGCGGCG GTTTCATGGC GGCGGTCACC
TATCAGAAGA CGAGCGCGGT CAATATGGCA ACGCGCGCGC CTTGCTCGCT TGCCGAAACC
ACGCCCGGCA TGCTGAGCTG CGTGAACAGC GCCTCGACGA TCGGCGGCCG CGCGGTGCTG
CCGAACGGCC AGCAGATCAA CTTCAATCAG GTGCTGGGCG GTAACGGCAA CTTCTTCGAG
CCGTACAGCG CTGCCAAGCA CAACTTCAAC TCGAACCCGT TCCTCAACGC GGTGAGCCCG
GTCGAGCGCG TGAGCACGGC GTTTTTCGCC GACTATGACA TCACTGACAA TATCGAGGCG
TTCGGCGAAT TCCTTTACAC CTTCCGCAAG TCGAATCAGA TCGCGACGCC CGGAACGCTG
CGCAACCTCT CGATCGCGGC GAGCAATCCC ACCAATCCGA CGGGGCAGAA TATCGTCCTC
ATCCAGCGCC GCCTCGCCGA GCCCGGCCCG CGCCAATTCT TCCAGGAAAC CGATACCTGG
CAGGGTACGT TTGGCCTCCG CGGCAAGCTC TCGAACGATT GGGGATGGGA AATCGCGGGC
GCCTTCGGCC GCAACACCGC GGTCGATGGT TCGACCAACA TCGCCAATCT CGAGCGAGTG
GCGAATTCCC TCGATACGAC CAAGTGCAGT CTTGCTGCCG GTGCCACGAT CCCCTGCGCC
GACTATCTCG GGTTCGGCGA CCTGACCCCG GAGGTTCTCG ACTATATCCT GTTCACGTCG
CGCGACCGCG GCGGCAACGA GCTTGCGACG GTCACCGCCG ATATCAACGG CGATCTCTTC
AAGCTGCCCG CAGGCCCCGT CTCCTTCGCG GCGGGTGTCG TCTATCGCAA GGAAAAGGGT
TGGCGCGATC CCGATCCGCT GACGGTGCTC GGTATTGCCA ACACCAACCA GCAGGATCCG
ATCTCCGGAA CGAGCACGGC GAAGGAAGCC TATCTCGAAC TGTCGGTGCC CGTTCTGGCC
GACACACCCT TCTTCCAGTC GCTTACCCTC GACGGCGCGG TTCGCTACTC GAACTACGAC
CTGTTCGGCA GCGACTGGAA CTACAAGGGG AGCGTCGACT GGGTCATCAA TGACAGCTTC
CGCCTGCGCG GCACCTACGG CACCGGCTTT CGCATTCCGA ACGTCCCCGA ATTGTTCGGC
GGCGTCTCCG AGGGCAATCT GACGACCACC GACCCCTGCT CGCGCTATTC GACCAGCGGC
AATGCGACAC TGATCGCCAA TTGTCAGGCG TCGGGCGTGC CGGCCAATTA TGTTCAGCTC
GGTACAACGA TCCTGACAAC GGTCGGCGGC AACGAGAATC TGAAACCCGA AAGCTCGACG
ACCTGGACCG TCGGGACGGT GATTTCACCG AAGGGACTGG TTCCGGGACT CTCGCTCACT
GCCGACTGGT TCGACATCAA GATCAAGGAT GCGATCCGTG CTATTCCGGG CTCGACAAAG
CTCAGCATTT GTTATGCGAG CCAGAATCTT TCGCATCCCT TCTGCGAAGA TTTTACCCGC
AGCCCGTTGA CCGGCGAGGT TACCTTCCTC TCCGCGCAAC CGATCAACAC GGGCCGCGAA
GAAATGAACG GCCTCGATCT GGGTCTCGTT TACAACAATG ACATCGGCAG CGTGAACGTC
TCGCTCGACG TCAACGTGAC CTATCTCAAC AAATATGTGG TCCTGCCTTT CCCCGGCGGC
GCGCCGATCG ACTTCGACGG CTTTATCGGC GGCGGCAATG GCGGCTATCC GAAATGGCGC
GGCTATGGCG TGCTGACCGC TGAAAAGGAC GGGGTCAGCG CGACCTGGTC GACCCAGTGG
ATCGGCAAGG CGACCGACTT CAATGCGGCC CCCGGCGACA TCGGCTACAG CACGCCGAAT
GTCTTCTACC ACAATCTCCA GGTCGCTTTC GAAATCGACG AGAAGACCCG GTTCCAGGTC
GGTGTCGACA ATCTTTTCGA TCGCAAGGCG CCCTATATCC AGAGCTTCAC CGATGCGAAC
ACCGACACGA TGACCTATGA CCTGCTCGGA CGGCGTTTCT ACGTCGGCTT CCGCACCGCG
TTCTGA
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| Protein sequence | MMTRTILLAS AAAVATFATP ALAQSGAATQ SPAAEDAPNG SDIVVTGSRI RRQDLAGVGP
ATVVSAEQIE NTGVVNIETV LQRLPANAGF AGNQTSAYWA NNGYGTAQVN LRGLGIKRTL
VLLNGRRLVA GGTGANSSPD LNMIPVAALA RTDVLKDGAS AIYGADAMAG VVNLVTRTDY
EGLGLSVRQG ITEKGDGSDF TADLLWGVRN DRGGFMAAVT YQKTSAVNMA TRAPCSLAET
TPGMLSCVNS ASTIGGRAVL PNGQQINFNQ VLGGNGNFFE PYSAAKHNFN SNPFLNAVSP
VERVSTAFFA DYDITDNIEA FGEFLYTFRK SNQIATPGTL RNLSIAASNP TNPTGQNIVL
IQRRLAEPGP RQFFQETDTW QGTFGLRGKL SNDWGWEIAG AFGRNTAVDG STNIANLERV
ANSLDTTKCS LAAGATIPCA DYLGFGDLTP EVLDYILFTS RDRGGNELAT VTADINGDLF
KLPAGPVSFA AGVVYRKEKG WRDPDPLTVL GIANTNQQDP ISGTSTAKEA YLELSVPVLA
DTPFFQSLTL DGAVRYSNYD LFGSDWNYKG SVDWVINDSF RLRGTYGTGF RIPNVPELFG
GVSEGNLTTT DPCSRYSTSG NATLIANCQA SGVPANYVQL GTTILTTVGG NENLKPESST
TWTVGTVISP KGLVPGLSLT ADWFDIKIKD AIRAIPGSTK LSICYASQNL SHPFCEDFTR
SPLTGEVTFL SAQPINTGRE EMNGLDLGLV YNNDIGSVNV SLDVNVTYLN KYVVLPFPGG
APIDFDGFIG GGNGGYPKWR GYGVLTAEKD GVSATWSTQW IGKATDFNAA PGDIGYSTPN
VFYHNLQVAF EIDEKTRFQV GVDNLFDRKA PYIQSFTDAN TDTMTYDLLG RRFYVGFRTA
F
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