| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2409 |
|---|
| Symbol | |
|---|
| ID | 4080847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2543330 |
|---|
| End bp | 2544064 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638010788 |
|---|
| Product | PepSY-associated TM helix |
|---|
| Protein accession | YP_617450 |
|---|
| Protein GI | 103487889 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0289711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0591759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCA TCCGACTGAC GCCGCTCTTC TTCCGGCGCA TCCACAAATG GGTCGGGCTG
ATCCTGGGTC TCCAGTTCCT GCTCTGGGCG CTCAGCGGAT CGGTGATGGC GCTGCTCGAC
AAGGATAAGG TCGGCGGGCA CGGCGGCGGG ATGTCGCATG CGCATCCACT GCCACCGGGG
GAATATTTCG ACGTGGCGGC CCTGCCGCGC GGCGAACCTG TCACGGGCGT GATCCTTCGC
GATCTCGGAA CCCGGCCGGT CTATGAAGTG CGCTCCGCAA AAGGCGTCCG TCTCGTCGAC
GCGACAAGCG GCGAGCACAT CCGGGTCGAC GAGGCCATGG CGCGCGAAGT CGCCTCCATG
ATGAACGAGG CGCCGATCCG AGAGGTGAGC GTAATCGCCA AGCCGAACCT CGAATCGCGC
GATCATGAGG GGGCGATGTG GCGCGTCGAT TTCGCGGACG ACGAGAACAG CAGCGCCTAT
GTCTCGCTCG ACACCGCGCG CTTCCTCGTC ATGCGCGGCG ACACCTGGCG GACGTGGGAC
TTCTTCTGGA TGCTCCACAA CATGGATTAC ATCAACCGGA AGAGCTTCAA CCACCCGCTC
ATCATTTTCG TCGCCTTTGG CGCGCTCTGG CTCTCGGGCA CCGGCTTCTA TCTGCTGTTC
AAGAGCTTCA GCCGCGCCGA TTTCCGCTGG CTGCGCCGGC GCCGCAAACC GGTGGTCGTC
ACGCGCACCA GCTGA
|
|---|
| Protein sequence | MKRIRLTPLF FRRIHKWVGL ILGLQFLLWA LSGSVMALLD KDKVGGHGGG MSHAHPLPPG
EYFDVAALPR GEPVTGVILR DLGTRPVYEV RSAKGVRLVD ATSGEHIRVD EAMAREVASM
MNEAPIREVS VIAKPNLESR DHEGAMWRVD FADDENSSAY VSLDTARFLV MRGDTWRTWD
FFWMLHNMDY INRKSFNHPL IIFVAFGALW LSGTGFYLLF KSFSRADFRW LRRRRKPVVV
TRTS
|
|---|
| |