| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2379 |
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| Symbol | |
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| ID | 4080819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2500247 |
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| End bp | 2503351 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010759 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_617421 |
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| Protein GI | 103487860 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0591037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.158126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCCC GTTCCCAGGT GTTTCCGGCC CAGGTGTTTT CGGCCCAGGC GTTTCTGGCC
GCCACGGCCT CGGCGATCGC GCTGACGGCC AGCCCTGCGA TGGCGCAGCC CGACGGCGAG
GAGATCGTCG TCACCGGATC GCGCATCGCG AAGAGCGAGT TTACCAGCGC CGATCCGATC
CAGATCATCG ACCCCGAAGC CGCAAAACGA CAGGGGCAGG TCCAGCTTGC CGACATGCTG
CGATCGGCGC CCGCGGCGCA GGGGTCGATC CAGATCAGCT CGGCGATTTC GAACCGCTTC
GTCGCGAACG GCGGCAATGA TGTGCAATCG CTGTCGCTGC GCGGGCTCGG CGCCGAACGC
ACGCTGGTGC TCATCAACGG CCGCCGCGCG GGCCCTGCGG GGATCCGCGG CGCGGTCGCG
CCCTTCGACC TCAATGTCCT GCCGCTGTCG GTGGTGCGGC AAGTGGAGGT GCTGAAGACC
GGCGCCTCGT CGATCTATGG CTCGGATGCC GTCGCGGGCG TGGTCAACGT CCTGACCCGC
GACGACCTCG ACGGTTTCGA GGGCGGTGGC TTTTCGTCGA TCACCGAGCA TGGCGGCGGC
GAAAGCTATG GCGCCGACGC GAGCTTTGGC AAAAAGTTCG ACCGCGGCCA TGTGTTTGCG
ACCGTTGATG TGTTCCGCCA GCAGAATCTG ACGCGCCGCG ACCGCGATTT CCTTTTCTGT
TCGGAAGAAT ATCTGAAGCG CGAGGCCGAT GGCAGCCGGG CCGACATTAT CGATTTCCGC
ACCGGACAGC CCGCGTGCAG CAGCACCCTG GGCAATGCGA TCGTCTTCGC CGATTTTTCG
GGCGTCGATG AAAACGGCTT CCCGACATTC GGCCCCGGCC TGATCGCACC CAACGGGCAG
GCGATCTTTG CCGGCCAATA TGGCGCCGGG TTCGCTGCCG TCGGCATCCC CATCAATGCC
TATAATCCGA TCGGCGTGTT CGGCCCCGCC GATTTCTTCG GGGTCAATTT TGACGGGCCG
TCGACCGGCG CGCTCAACCA GTTCGAGCGG GTCGAACAGG ATTCAGATGT CTTTTCGGCC
GTCAGCCGGG TGAGCGCCTT TGCCGATGGC GCCTATGAGG TGACCGATAG CGCCACCGCC
TATGGCGAGT TCCTGTTCAG CAACCGCAAG TCGGTGAACA ACGGGTTTCA GCGCATCGAG
CTCGACCAGT TCACCGGTGC ATCCTTCCTG CCCTTTTTCC TGTGCGACCC GACGCAGTTC
AATTGCGACC CCGGTGACTT GGGCGATCCG TTCAACGCGG AGTTCGGGGG CAATATCATC
CTGCGCCCGC GCGTGCTGGT GAAGTCGGAG AGCGAGGCCG ACGTCGATTA TTATCGCGGC
GTGCTGGGGC TGCGCGGCGA CCTCGGCGGC GGCTGGAAGT GGGATGTTCA CGGCCAGCAC
AGCCGCTCGG ACGCCAGCTA CACGCAGCAT GTCATCTATC GGGACGCGAT CGCCTCGCAG
ACCTTGCGCA CGCGGTCGTG CGTGGGGACG GTGACGGCGA TCCGCGGCGC GGACTGCATC
GACATCGACT TCACCGATCC GCGCGTGCTC AGCGGCGACT TCACGGCGGA GGAGCGCACC
TTCCTGATGG GGCGTGAGAC GGGGCGGACC TTGTTCAAGC AAAGCTCCGC CGAGGCGCTG
CTGACCGGCA AGCTGTTCGA CCTGCCCGCG GGGCCGGTCG GTGCGGCGTT CGGTGCGACG
ATCCGCCGCG ACGAAATTAA TGACACGCCG GGCGATGCAA CGCTTGCGGG CAATGTCGCC
AATTTCACGA CCTCGGGCAT CACCGCGGGG CGCACCGTGT CGAAAGAGCT GTTCGGCGAG
GTCGAACTGC CGCTGATCGA AGGCGTGCCG ATGGTCGAGC GGCTGACACT GTCGGGCGCC
GCACGCTACA CGCATGTCGA GGCGACGCGC CGCGACGGCG TGTCCGACCG CTTCAGCGAT
ACGACATGGA AGGTCGGCGC CGACTGGGCG GTGACCGACT GGCTGCGCCT GCGCGGCACC
TGGGGCACCT CGTTCCGCGC GCCCGCGCTG TTCGAACTGT TCCTTGAGGA CCAGACGGGT
TTCCTCGGCC AACAGGCGAT TGATCCGTGC ATCCAGACGG CCGCGCGGCT CGCGGCGGGG
GCGATCAGCC AGCGCGTCTT CGACAATTGC GCCGCCGACG GCATCGCGCC CGACTATGCA
GGCGGCCTCG GCCCCGCGAC GATCGTGTCG GGGGGCGGCA TCGGCCGATT GGAGCCCGAA
ACTTCGACCG CGAAAACCGT GTCGCTGATC CTGACCCCCG ATCTGTCCGG GGCGTTGTGG
GGCGGGCTGC GCACCCGCCT TGCGGTCGAT TATTTCGACA TCAAGGTCTG GCAGGAGATC
ACCCTGCTCG GCGCGGGCAA TATCCTGGCC GGCTGTTATG ATTCGGCGTT TTTCCCCGAC
GAGCCGCTGT GCGGGCTGTT CACGCGCGCG GCGGCTGGGC CCGACGCCGG GAGCATCGCA
AGCGTCACCG ACCGCTATGT CAACATCAGC CGCCAGCGCA ATCGCGGCGT CGACCTGTCG
CTCGCGCTCG ATCAGGATCT GGGCAGGCTG GGCTCGCTGG CGTTTCGCGC GCAGATGACC
TGGCAGGTCG AGGACAAGGT TGCCCTCTTC CCCAGCATGA CCATCGACGA CAATGGCACG
ATCGGCAATC CGAAATGGGT CGGCGATTTC ACGCTCGGCT GGACGAAGCA TAAATGGACG
CTTTTCTATG GCCTCGACGT CACCGGCGCG GCGTCGAACA TGGCGGAACT GCTGCGCGCG
CAGGGCGGCG ATCCGTGCCG CACGTCGAGC TTTCGCCCCG GCGGGCGCTT CTGCCCCGAT
GTCAGCGTGC CCGCGACCTT CTATCATTCG CTGTCGCTGA GCCGCGACGT TGCCGAACGC
TTCCGCATCA CGCTTGGCAT CGCCAATCTG TTCGACACGC CGCCGCCGCG GGTGTCAACC
GTGGTCACCG CGACGCCGCC GGTGATCGGG CAGGCACCCG CGTTCGGGAC GCAATATGAT
TATCTGGGGC GGCGGATGTT TTTGAGCGTG CGGGGGAAGA TTTAG
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| Protein sequence | MGARSQVFPA QVFSAQAFLA ATASAIALTA SPAMAQPDGE EIVVTGSRIA KSEFTSADPI
QIIDPEAAKR QGQVQLADML RSAPAAQGSI QISSAISNRF VANGGNDVQS LSLRGLGAER
TLVLINGRRA GPAGIRGAVA PFDLNVLPLS VVRQVEVLKT GASSIYGSDA VAGVVNVLTR
DDLDGFEGGG FSSITEHGGG ESYGADASFG KKFDRGHVFA TVDVFRQQNL TRRDRDFLFC
SEEYLKREAD GSRADIIDFR TGQPACSSTL GNAIVFADFS GVDENGFPTF GPGLIAPNGQ
AIFAGQYGAG FAAVGIPINA YNPIGVFGPA DFFGVNFDGP STGALNQFER VEQDSDVFSA
VSRVSAFADG AYEVTDSATA YGEFLFSNRK SVNNGFQRIE LDQFTGASFL PFFLCDPTQF
NCDPGDLGDP FNAEFGGNII LRPRVLVKSE SEADVDYYRG VLGLRGDLGG GWKWDVHGQH
SRSDASYTQH VIYRDAIASQ TLRTRSCVGT VTAIRGADCI DIDFTDPRVL SGDFTAEERT
FLMGRETGRT LFKQSSAEAL LTGKLFDLPA GPVGAAFGAT IRRDEINDTP GDATLAGNVA
NFTTSGITAG RTVSKELFGE VELPLIEGVP MVERLTLSGA ARYTHVEATR RDGVSDRFSD
TTWKVGADWA VTDWLRLRGT WGTSFRAPAL FELFLEDQTG FLGQQAIDPC IQTAARLAAG
AISQRVFDNC AADGIAPDYA GGLGPATIVS GGGIGRLEPE TSTAKTVSLI LTPDLSGALW
GGLRTRLAVD YFDIKVWQEI TLLGAGNILA GCYDSAFFPD EPLCGLFTRA AAGPDAGSIA
SVTDRYVNIS RQRNRGVDLS LALDQDLGRL GSLAFRAQMT WQVEDKVALF PSMTIDDNGT
IGNPKWVGDF TLGWTKHKWT LFYGLDVTGA ASNMAELLRA QGGDPCRTSS FRPGGRFCPD
VSVPATFYHS LSLSRDVAER FRITLGIANL FDTPPPRVST VVTATPPVIG QAPAFGTQYD
YLGRRMFLSV RGKI
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