| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2351 |
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| Symbol | |
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| ID | 4080752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2475138 |
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| End bp | 2476028 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638010731 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_617393 |
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| Protein GI | 103487832 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0828194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACCGGT TGCTGACGCT GGAAATGTTC GTCGCGGTGG CGAGCGAAGG CGGTTTCGCC
GCCGCCGCGC GCAAGCTGGG CAGTTCGCCG CCAGCAGTGA CGCGCGGGAT CGCGGCGCTT
GAGGCGCGGC TCGGCACGGC GCTCTTCCAT CGTTCGACGC GCGCGGTCGC GCTGACCGAC
GCCGGCGCGG CCTTTCTGGG CGAGGCGCGG CGCATCCTCG CCGACCTCGC GGGCGCCGAA
CGCGCGCTGC GCGGCGCCGC GGCAGCCCCC AGTGGCCAGC TCCACCTCAC CGCGCCGGTG
ATGTTCGGGC GGCTGCACGT GCTGCCGGTG GTCGATGCGA TGATGACCAA GCACCGCGAG
CTTGGCGTGC GGATGATGCT GATCGACCGC AACGTCCGTA TCGTCGAGGA GGGCATCGAC
GTCGCAGTGC GGATCGGCGC GCTCGCCGAT TCGGGGCTGA AGGCGGTGCG CATCGGCCGC
GTGCGCCAGA TGCTCGTCGC CAGCCCCGCC TATCTCGCGC GCCGCGGCGC GCCGCACGGC
ATCGCGGATC TCAAGGGGCA TGATCTGATC GGCACGATGG GGCCGCGCTG GACGAGCGAA
TGGCAGTTCG CCCGCGAACG CTGGCGGCTG CCCGCGCCGC CGCGGTTGAC CGTCAACACC
GTCGACGGCG CGCTCGCGGC GGCCGAGGCG GGACTGGGGA TCGCGAACCT CTTGTCCTAT
CAGCTAGCCG AGGCGATCGA CGCGGGGCGG CTGATCGCGC TGCTGGAGCA GGAGCAGCCG
CCCGCGCTGC CCGTCCATCT GCTGTTCGAA CCGTCGCGCG CGGCGCTGCC CGCGGTGCGG
CTGTTCGTCG AAGCGATGCA GGCGCGTATG CGCATGGCGG GGCTGGGATG A
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| Protein sequence | MDRLLTLEMF VAVASEGGFA AAARKLGSSP PAVTRGIAAL EARLGTALFH RSTRAVALTD
AGAAFLGEAR RILADLAGAE RALRGAAAAP SGQLHLTAPV MFGRLHVLPV VDAMMTKHRE
LGVRMMLIDR NVRIVEEGID VAVRIGALAD SGLKAVRIGR VRQMLVASPA YLARRGAPHG
IADLKGHDLI GTMGPRWTSE WQFARERWRL PAPPRLTVNT VDGALAAAEA GLGIANLLSY
QLAEAIDAGR LIALLEQEQP PALPVHLLFE PSRAALPAVR LFVEAMQARM RMAGLG
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