| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2335 |
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| Symbol | |
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| ID | 4080582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2463004 |
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| End bp | 2464785 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638010715 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_617377 |
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| Protein GI | 103487816 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.699983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.515906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTC CCGCCGACGC GCTCCTCCCG CTGCTCAAAT CCACCTTCGG CTTCGACGCC
TTTCGGGGCC GTCAGGGCGA GGTGGTCGCG CGGGTGATGG CGGGCGAGCG CACGCTGGCG
GTGATGCCGA CGGGGGCAGG AAAATCGCTG ACCTATCAAT TGCCCGCTGT GGCGCTGGAG
GGCTGCGTCG TCGTCGTGTC GCCGCTGATC GCGCTGATGC ACGACCAGCT GCGCGGCGCG
CGCGCGGCGG GAATAAGAGC AGCGTCGCTC ACCAGCGTCG ATGCCGATTT CGCCGACACG
CGGCAGGCCT ATCGCGACGG GCAGCTCGAC CTTCTCTATA TCACGCCCGA GCGCGCGACG
GGCGAGGGCT TCCGCTCGCT CATGGAAGCG CGCGCACCTG CGCTGTTCGC GATCGACGAG
GCGCATTGCG TTTCGGAATG GGGGCATGAT TTCCGCCCCG ATTACCGGCT GCTCAGGCCG
CTTCTCGATG CCTTTCCCGA CGTTCCGCGG CTCGCGCTGA CGGCGACCGC CGACAAGCAT
ACGCGCGAGG ATATTCTCGT CCAGCTGGGC ATTCCGGCCG AGGGGCTGGT GCTCGCGGGC
TTCGACCGGC CGAATATCCG CTATCGGGTA ACACCGCGGG TGAGCCCGGC GAAGCAGCTG
GCCGATTTCA TCGCCGCCAA TCCGGGGCCG GGGATCGTCT ATTGCCCGAC GCGCGACGGG
ACCGAACGCA TGGCCGAAAG GCTCGCCGCC GCGACGGGGC GCAGCGTTGC CGCCTATCAC
GCCGGGCTGG ACCCCGAGCG GCGCGCGCGG GTGCAGCATG ATTTTGTCGC GTCGGAGGAC
GGCATCGTCA CGGCGACGGT CGCCTTCGGC ATGGGGATCG ACAAGCCCGA CGTGCGTTTC
GTCGCGCACG CGGGCCTGCC GAAATCGATC GAAAGCTATT ATCAGGAAAC GGGCCGCGCG
GGGCGCGACG GCGACCCGGC CGAGGCGCTG ATGCTGTGGG CCGCCGATGA TTTTGCGCGC
GCCCGCGCGC GCTTGTCCGA ACTGCCCGAG GCGCGCGTCG CGGCCGAACG CGCGCGCCTC
AATGCGCTCG CGGCGCTGGT CGAAACGGCC CAGTGCCGCC GCGCGCTGCT GCTCCGCCAT
TTCGGCGAAA ATCCGCCCAC ACGCTGCGGC AATTGCGACA CCTGCCTCGA CCCGCCGAAA
CAGGTCGATG CGACGGTGCT CGCGCAGAAA TTGATGAGCG CGGTCTATCG CACGGGTCAG
AGTTTCGGCG CGGGCCATGT CGAGGCGGTG CTGACGGGGC GGAGCGACGA ACGGGTCGTC
AGCCGCGGGC ACGACAAATT GTCGGTGTTC GGAATCGTCG AGGGCGAGGA AGCGCGGCTG
ATCAAGCCGC TGGTCCGCAC GCTCGTCGCG CGCGAGGCGT TGCAGGCGAC CGAGCATGGC
GGGCTGATGT TCGGCCCCGC CGGCCGCGCG GTGATGAAGG GCGAAGCGCC GGTGCTGATC
GCCGAGCCGC CGGTGAAACG TACGCAGCGT GCGAGCCGCA GCGACCGCGC GGCGGCCAAT
CCGGTCGGCG ATCCGCTGTT CGAGGCACTG CGCGGCATCC GGCGCGAGCT TGCCGCCGAG
GCGGGGGTGC CGCCCTATGT CGTGTTCCAC GACGCGGTGC TGCGCGCGAT GGCGAGCGAG
CGCCCCGCGA CGCGCAGCGA TCTTGCCGCG ATTCCTGGCG TCGGCGCCAA AAAACTGGAG
GCGTGGGGCG ATGCGTTTCT GGATGTGATC CGGCAGTTCT GA
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| Protein sequence | MSSPADALLP LLKSTFGFDA FRGRQGEVVA RVMAGERTLA VMPTGAGKSL TYQLPAVALE
GCVVVVSPLI ALMHDQLRGA RAAGIRAASL TSVDADFADT RQAYRDGQLD LLYITPERAT
GEGFRSLMEA RAPALFAIDE AHCVSEWGHD FRPDYRLLRP LLDAFPDVPR LALTATADKH
TREDILVQLG IPAEGLVLAG FDRPNIRYRV TPRVSPAKQL ADFIAANPGP GIVYCPTRDG
TERMAERLAA ATGRSVAAYH AGLDPERRAR VQHDFVASED GIVTATVAFG MGIDKPDVRF
VAHAGLPKSI ESYYQETGRA GRDGDPAEAL MLWAADDFAR ARARLSELPE ARVAAERARL
NALAALVETA QCRRALLLRH FGENPPTRCG NCDTCLDPPK QVDATVLAQK LMSAVYRTGQ
SFGAGHVEAV LTGRSDERVV SRGHDKLSVF GIVEGEEARL IKPLVRTLVA REALQATEHG
GLMFGPAGRA VMKGEAPVLI AEPPVKRTQR ASRSDRAAAN PVGDPLFEAL RGIRRELAAE
AGVPPYVVFH DAVLRAMASE RPATRSDLAA IPGVGAKKLE AWGDAFLDVI RQF
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