| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2322 |
|---|
| Symbol | |
|---|
| ID | 4080607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2450759 |
|---|
| End bp | 2451346 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638010702 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617364 |
|---|
| Protein GI | 103487803 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3803] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.691151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.430047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAGA AACAATTCTT GGCTGCCACC GACATTCCCC CACCCCCCGC CGACTGGGCG
CAGCGACTGC TCGCCTTCTG GTTCGACCGT CATACGATGG ACGACTGGTA CGGCGGCGGC
CCCGATTTCG ACGCCGAGGT TCGCGACCTC GCCGAACACT GGCACCAGGC GCTTCGCTCG
CAGCCCGCCG ACGCCTTCCT CACCGATCCC GACACCGCAC TCGCTGCGGC GATCCTGTTC
GACCAGGTTC CGCGCAACAT CTACCGCGGC CACGCCGACG CCTTTGCCAC CGACAGCCTC
GCCCGCGCGA TCGCGCGCGG CATCGTGACG CGCGGCTGGC ACCAGAATTG GCCCGACGAG
CGCCGCAAGT TCGCCTGCCT GCCCTTTCAG CACAGCGAAG ACATCGACGA CCAGCGCGAA
TCGCTGCGCC TTTTCGCCGC GTTCGACGAC CCGATGTTCC GGGATTATGC GCAGAAGCAT
TTCGACATCG TCGACCGCTT TGGCCGCTTT CCGCACCGCA ACGAGGCGCT CGGCCGCGCG
ACCCGGCCGG AGGAAGAGGC AGCGATAGAA GAGGGCAGGA ATTGGTGA
|
|---|
| Protein sequence | MMEKQFLAAT DIPPPPADWA QRLLAFWFDR HTMDDWYGGG PDFDAEVRDL AEHWHQALRS
QPADAFLTDP DTALAAAILF DQVPRNIYRG HADAFATDSL ARAIARGIVT RGWHQNWPDE
RRKFACLPFQ HSEDIDDQRE SLRLFAAFDD PMFRDYAQKH FDIVDRFGRF PHRNEALGRA
TRPEEEAAIE EGRNW
|
|---|
| |