| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2314 |
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| Symbol | |
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| ID | 4080599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2442298 |
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| End bp | 2443506 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010694 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_617356 |
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| Protein GI | 103487795 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.63249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATT CATCGCATAG CTGGCCCGCC GAGGCCGAAA CCCTCCTCGA CGACCTTGTC
GACCTGCGCC GCGCGATTCA TCGCGAGCCG GAGCTGGGCC TCCAGAACCC CAGGACGCTC
GCCAAGATCA AGGACGCGCT CGCAGGGTTG CCGCTCGAGT TTCGCGAGGG GCCCTCGACG
ACCGGGCTGG TCGCGATCCT GCGCGGGCCC GCGAACGGGC GCACCGTGCT GCTGCGCGGC
GACATGGATG CGCTGCCGCT CGTCGAGGAC ACCGGGCTCG ATTTCGCGTC CGAAACGACC
GGCGCGATGC ATGCGTGCGG GCACGACACG CATGTCGCGA TGCTGGTCGG CGCGGCGAAG
CTGCTCTGCG CGGCGCGCGA CCGCTTGCCC GGCACCGTCC TGTTCATGTT CCAGCCGGGC
GAAGAAGGCC ATCATGGCGC GCGCTTCATG CTGGACGACG GGCTGATCGA CCCGCTGCCC
GACGCCGCCT TTGCGCTCCA CATCATGCCC AACGCGCCGC ACGGCATCTT TGCCGGGCGC
GCGGGGCCGC TGCTCGCCTC GTCGGATGTC CTCTCGATTA CCGTCAAGGG CGCGGGCGGG
CACGCTTCGA TGCCGCACGA TGCGGTCGAT CCGATCCCCG TCGCCTGCGC GATCGTCACC
GCGATCCAGA CGATGGTGAC GCGACGCATT TCGGTGTTCG ATCCCGCGGT TGTCACGATC
GCGAAGATCA CTGCCGGGAC CACGAACAAC ATCATCCCCG AGACCGCCGA GATGCTGGGC
ACGATCCGCA CCCTGTCACC CGAACGCCGC GCCATGGTCG CGCGCGAGCT GAATCGCCTC
GCTCCCGCAA TCGCCGAAGC GCATGGCTGC ACCGCCGAGG TCCATATCGA GGAAGGTTTC
CCCGTCACCA TCTGCGACAG CCGCGCCGCC GCCTTCGGTC AGCGCGTCGT CGAGAATGTG
TTCGGCGAAG CGGCGTGGCT GACGATGGAC AATCCGGTGA TGGGCGCCGA GGATTTCGCC
TATGTCCTCG AAAAAGTCCC CGGCGCGATG TTCTGGCTCG GCGCCAGCCA CGCAGGCAGC
GACTGGCGCC AATGCTGCGG CCTGCACAGC AACCGCATGG TGCTGGACGA AAAGGTCATG
GCGCGCGGCG CGGCGCTGCA CGCAGCGCTG GCAGAACGGT TTTTGAACGA GGGGTTCGGG
CAGGAATAG
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| Protein sequence | MDNSSHSWPA EAETLLDDLV DLRRAIHREP ELGLQNPRTL AKIKDALAGL PLEFREGPST
TGLVAILRGP ANGRTVLLRG DMDALPLVED TGLDFASETT GAMHACGHDT HVAMLVGAAK
LLCAARDRLP GTVLFMFQPG EEGHHGARFM LDDGLIDPLP DAAFALHIMP NAPHGIFAGR
AGPLLASSDV LSITVKGAGG HASMPHDAVD PIPVACAIVT AIQTMVTRRI SVFDPAVVTI
AKITAGTTNN IIPETAEMLG TIRTLSPERR AMVARELNRL APAIAEAHGC TAEVHIEEGF
PVTICDSRAA AFGQRVVENV FGEAAWLTMD NPVMGAEDFA YVLEKVPGAM FWLGASHAGS
DWRQCCGLHS NRMVLDEKVM ARGAALHAAL AERFLNEGFG QE
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