Gene Sala_2297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2297 
Symbol 
ID4080793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2424998 
End bp2425582 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content69% 
IMG OID638010676 
Producthypothetical protein 
Protein accessionYP_617339 
Protein GI103487778 
COG category[R] General function prediction only 
COG ID[COG3942] Surface antigen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.905782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCAAC GCCGCTTTCT GAACGCCGCC GTCGCGTCGG CGATGACGCT CGCCGGGCTG 
CTCGCCGGCG CTCCCGCCGC GGCGCAATCC TATCTGCAAT GCGTTCCCTT CGCGCGCGCC
GAATCGGGCG TCGACATCCG CGGCAACGCC AGGACCTGGT GGGCGCAGGC GGCGGGAAGC
TATGCGCGCG GCAATGAACC GCGGCCGGGT GCGGTCATGG CCTTTGCGGG CACGCGCGGG
ATGCCGATGG GTCATGTCGC GGTGGTCAAG AAGATCGTCG GCGACCGCGA AATCCTGATC
GACCATGCCA ACTGGTCGCC GATCAATGGC CGCCGCGGCC AGATCGAGCG CGATGTTCGC
GTCGTCGACG TCAGCGACGC AGGCGACTGG AGCCTGGTGC GCGTCTGGTA CGCCCCGATC
GGCGACCTTG GCCTGCGCGC CAATCCGGTG CAGGGCTTCA TCTATGCGGG CGGCGAAGCG
GGCGGGACGA CCCCGGCGCC CAGCTTCAAG GCGCCCGTCT GGGCAACGAA TGACTGGAAA
CCCGGCAACG GCCTTGCGCT CGTTGCCGCC TCGCTCGGCA ACTGA
 
Protein sequence
MVQRRFLNAA VASAMTLAGL LAGAPAAAQS YLQCVPFARA ESGVDIRGNA RTWWAQAAGS 
YARGNEPRPG AVMAFAGTRG MPMGHVAVVK KIVGDREILI DHANWSPING RRGQIERDVR
VVDVSDAGDW SLVRVWYAPI GDLGLRANPV QGFIYAGGEA GGTTPAPSFK APVWATNDWK
PGNGLALVAA SLGN