| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2279 |
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| Symbol | |
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| ID | 4080736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2400773 |
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| End bp | 2402941 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638010658 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_617321 |
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| Protein GI | 103487760 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG CCCGCGTCCT CTTGCTCACC GCCGCACTCG GCCCGCTCGA CTATCGCGTG
CCGCAGGGCA GCGAAGCGCC CCTCGGCAGC GTCGTCATCG CGCCGCTCGG CCCGCGACGG
ATTGGCGGCG TGGTGTGGGA GGATGAAAGC TTCGGCGCGC CCGACCCCGT CGGCGACAAC
CGGCTTCGCA ACCTTTACGA AATCGTCCCC GTCCCGCCGA TCGCCGCGCC GCTCCGCCGC
CTCGTCGAAT GGACGAGCGA CTATTATCTA AGCCCCCCCG GCTCGGTGCT GCGCATGTTG
TTGCCCGGCG TCGCCTTCGC CGATGCGCGG CGCCCGATCG TCGAATATCG CGCGACGGGC
GAACTGCCCG CGCGGATGAC GCCGCAGCGG ACAGTCGCGC TGGGGAAGAT CGGCGCGCGC
CAGGGGACGG TGCGCGAGCT GGCGAAGCTC GCCGACGTCA GCGAGGCGGT GATCCGCGGC
CTCGTCCATG TCGGCGCACT CGAAGCGGTG AGCGCTTCGG CCGACCAGCC CTGTCCCGAA
CCCGATCCCG CCTTTGCGCC GCCGGACCTG TCGGCGGAAC AGACGGCGGC GGCGGCGCAG
TTGCGCGCAG CGGTTGCCGC CGCGAGGTTC GAAACATTGC TGCTCGACGG CGTCACCGGA
TCGGGCAAGA CCGAAGTTTA TATGGAGGCG ATCGCTGCCG CGGTGGACGC GGGGCGGCAG
GCGCTGGTGC TGCTCCCCGA AATCGCGCTC ACCGAACCGA TGTTGACGCG CTTTGCCGCG
CGTTTCGGTT GTGAACCGGT CGCGTGGCAT TCGGGCCTGC GCTCCACCGA GCGCCGCCGC
GCCTGGCATG CGATTGCCAG CGGCGAGGCA CGGATCGTCG TCGGGGCGCG CTCGGCGCTG
TTCCTGCCCT ATGCGCGGCT CGGCGTCATC GTCGTCGACG AGGCGCATGA GACGAGCTTC
AAGCAGGAGG ATGGCGTCCA TTATCACGCG CGCGACGTCG CGGTGATGCG CGGGTATTTC
GAGGGCCTGC CGGTGATCCT CGCGAGCGCC ACCCCGGCGC TCGAAAGCCT CGCACAGGTC
GAGGCCGGGC GCTATCGCCA TATCCAGCTG CCCGCGCGTT TCGGCGGCGC CACGCTGCCC
GATCTCGCCG CGATCGACAT GCGGCAGGAT CCACCCGACC GCGGCCGCTG GCTGGCGCCG
CCGCTCGTCG ACGCACTCGC CGACCGGCTC GAAAAGGGCG AGCAGAGCCT GCTGTTCCTC
AATCGCCGCG GCTTTGCGCC GCTGACGCTC TGCCGTACCT GCGGCCACCG CATCCAGTGC
CCCAATTGCA CCGCGTGGAT GGTCGAGCAC CGGCTCGTCC ACCGCCTCGC CTGCCATCAT
TGCGGCCATG TCATGCCGCC GCCGCGCCTC TGCCCCGAAT GCGAGGACGA GGACAGCCTC
GTCGCCTGTG GCCCCGGCGT CGAGCGCGTC GCCGACGAAG TCGCGCTGCG TTTCCCGGAG
GCGCGCACCG CCATCGTCAC CTCCGACACG CTCTGGTCGC CCGCCAGGGC CGCCGAGTTC
GTGGCCAATG TCGAGCAGGG GCTGGTCGAC ATCATCATCG GCACCCAGCT CGTCACCAAG
GGCTATCATT TCCCGAACCT CACGCTCGTG GGCGTCGTCG ATGCCGACCT CGGCCTCGAC
GGCGGCGACC TGCGTGCGTC GGAACGCACC TTCCAGCAGA TCGCGCAGGT CGCGGGGCGC
GCCGGGCGCG GGGTCAAGCC CGGCGAGGTG CTGATCCAGA CGCGGGTGCC CGACGCGCCG
GTGATGGCCG CGCTCGTCGC GGGCGACCGC GACGGCTTCT ACGCCGCCGA GGCCGCGGCG
CGGCGCGCGG CGGGCGCGCC GCCCTATGGC CGCTTCGCAG CGCTGGTCAT TTCGTCGGAG
GACATCGAGG TCGCGCGCGG CGTCGCGCAG CGATTGGGGG CAAAGGCGCC CGTCGCCGAC
GGCCTCGCCG TCTATGGCCC CGCCCCGGCC CCCCTCGCAA TGCTGCGCGG CCGCCACCGC
TTCCGCCTGC TCCTCCACGC CCCGCGCAGC TTTGACCTGC AAGGGACGAT CCGCGCGTGG
GTGGACAGCA TCGACTGGCC CGCAAAGGCG CGGCTCGCGA TCGACGTCGA TCCCTATAGT
TTCGTTTGA
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| Protein sequence | MTRARVLLLT AALGPLDYRV PQGSEAPLGS VVIAPLGPRR IGGVVWEDES FGAPDPVGDN
RLRNLYEIVP VPPIAAPLRR LVEWTSDYYL SPPGSVLRML LPGVAFADAR RPIVEYRATG
ELPARMTPQR TVALGKIGAR QGTVRELAKL ADVSEAVIRG LVHVGALEAV SASADQPCPE
PDPAFAPPDL SAEQTAAAAQ LRAAVAAARF ETLLLDGVTG SGKTEVYMEA IAAAVDAGRQ
ALVLLPEIAL TEPMLTRFAA RFGCEPVAWH SGLRSTERRR AWHAIASGEA RIVVGARSAL
FLPYARLGVI VVDEAHETSF KQEDGVHYHA RDVAVMRGYF EGLPVILASA TPALESLAQV
EAGRYRHIQL PARFGGATLP DLAAIDMRQD PPDRGRWLAP PLVDALADRL EKGEQSLLFL
NRRGFAPLTL CRTCGHRIQC PNCTAWMVEH RLVHRLACHH CGHVMPPPRL CPECEDEDSL
VACGPGVERV ADEVALRFPE ARTAIVTSDT LWSPARAAEF VANVEQGLVD IIIGTQLVTK
GYHFPNLTLV GVVDADLGLD GGDLRASERT FQQIAQVAGR AGRGVKPGEV LIQTRVPDAP
VMAALVAGDR DGFYAAEAAA RRAAGAPPYG RFAALVISSE DIEVARGVAQ RLGAKAPVAD
GLAVYGPAPA PLAMLRGRHR FRLLLHAPRS FDLQGTIRAW VDSIDWPAKA RLAIDVDPYS
FV
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