Gene Sala_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2233 
Symbol 
ID4080247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2346728 
End bp2347093 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content67% 
IMG OID638010611 
Productthioesterase superfamily protein 
Protein accessionYP_617275 
Protein GI103487714 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTCG AATCGCCGAC GCCCGATGGC CGTCCGCGCG CGCGGGTGCG CATGGTCCCC 
GAACGCAAGC ACAGCAATTT GGGCGACAAT GTCCATGGCG CGGTGACACT GGCGCTCGTC
GATATCGCGC TGTTCGCGGC GTCGCACCAA TTCGGCTCGC TCAACGCCGG TCATTCGGTG
ACGCTCGACC TGTCGACGCA GTTCGTCGGC GCCGGCCGCG TCGGTGAGCC GCTCGACGCG
GTGGTCGAAC TGGTACGCGA AACGGGGCGG CTGATCTTCC TGCGTGGGCT GGTCGTGCAG
GGCGCCGATG ACAGCCATAT CGTGCTGAGT TTTGCCGGAA CGATCCGCAA GGCCAGCACC
GGGTGA
 
Protein sequence
MRLESPTPDG RPRARVRMVP ERKHSNLGDN VHGAVTLALV DIALFAASHQ FGSLNAGHSV 
TLDLSTQFVG AGRVGEPLDA VVELVRETGR LIFLRGLVVQ GADDSHIVLS FAGTIRKAST
G