| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2221 |
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| Symbol | |
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| ID | 4080292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2331783 |
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| End bp | 2333768 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010599 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_617263 |
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| Protein GI | 103487702 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.431319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA GCACCGCGAC CACGCCCAAC GATCCCGCCG GCCCCTGGGC CATTCCCGTC
CGTCGGCCGC TACCGGGCGA GGACAAGCCG CGCAGCACCA CGAGCTTTCC GCGCAAGGTC
TGGAAACTGC TCGTCGCGAT CAAGGATGCG CTGGCGCTGA TCTTCCTGCT GCTTTTCTTC
GTGGCGCTGT TCGGGCTGCT CGCGGGGCGC CCCAATGCGG GCCTGCCGGT CAGCGAGGGT
GCGCTGCTGA TCGAGCTTGA CGGCATCGTC ACCGAACAGC CGACCGAAAC CGATCCCTTC
GCGGCGCTGT CGGGCGGCCC GCAACTCAAG GAAATCCGCA CGCGCGATGT CGTCCACGCG
CTCGAAACCG CGGCTTCGGA CAAGCGCATC ACCTCGGTCG TGCTCGACCT CGACCGCTTC
CTCGGCGGCG GGCAGGTGTC GCTCGCCGAA ATCGGCGGCG CCATCGACAA GGTGCGCGCA
AAGAAAAAGC CGGTGCTGGC CTTTGCCACC GCCTATACCA CGGACAGCTA TCAGATCGCC
GCACATGCGA GCGAAATCTG GGCCGACAGT ATCGGCGGCG TCGCGATTGC GGGACCGGGC
GGGTCGCGCC TCTATTACAA AGGGTTGATG GACCGGCTGG GCATCACCGC GAACATCTAT
CGCGTCGGCA CCTTCAAAAG CGCGGTCGAG CCATATCTCC GCAGCGACCA GTCGCCCGAA
GCGAAGGAAG CCAACCTCGC CTATGCCAGC GTCCTGTGGG ACAATTGGCT GGCGGATGTG
AAGAAAGCGC GCCCGGCGGC CAAGCTCGAC GCCTATATCG CCGATACCGT CGGCGCGGTG
CGCGCGGCGG GCAATGACCT GTCGAAGGCT TCGCTCGACG CAGGGCTGGT CGACAGGCTC
GGCAGCCGCA TGGCGTTCAG CCGCCGCGTC GCCGAAATCA GCGGCGCGAC CGACGAGGGC
AAGCCGTGGG AGTTCAACGC CATCCCGCTC GAAAACTGGG TCGCCGCCAA TCCGCCCGCA
GAAAAGGGCA GCGCGATCGC GGTTGTCCCC GTCGTCGGCG ACATCGTCGA TGGCGAGGCG
CCGACGGGGC TTGCCGGCGG CACGACGATC GCCGAGCACA TCCTCGACGC CGCCACCGAC
AGCAGCGTCA AGGCGATCGT CCTGCGCGTC GATTCGCCCG GCGGATCCGT GCTGGCGTCG
GAGGAGATCC GCCAGGCGCT GCTCGCGGCC AAGGCCAGGA AGCTGCCCGT CGTCGTGTCG
ATGGCGAATG TCGCCGCGTC GGGCGGTTAT TGGATTTCGA CCCCGGCAGA CCGCATCTTT
GCCGAACCCG AAACGATCAC CGGGTCGATC GGCGTGTTCG GCATCCTGCC GAGCTTCGAT
CGGGCGCTGG CCAAGATCGG CGTCAACGCC GACGGCATCG CCACGACGCC GCTGTCGGGG
CAGCCCGACA TCTTCGGCGG CGTGAACGAG GAGTTCAACG CGCTGGCGCA GGCGAGCGTC
GAGGACGTCT ATACGCGCTT CACCGGGCTG GTCGCCAAGA GCCGCAAGCA GCCGCTCGAC
AAGATCCTGC CGATCGCCGA AGGGCGCGTC TGGGCGGGCG GCACCGCGCG CCAGCTTGGC
CTCGTCGACC AGTTCGGCGG CCTCCCCGAA GCGCTCGCCG CCGCGGCGAA ACTCGCCAAG
GTCGAGGGCG ATTTCCACGC CAGATATTTC GAGGAAGAGC CGAGCGAATT GTCCAGGCTG
CTCGCCAACT GGTCGGGCGC CGGAGAAGAG GAAACCGCGG CGCTCCCGCG CGGCTGGTTC
GGCATCGCGG CGATGAACCG CCAGCTCACC GAGCGACGGC TGGTGCAGGA TCTGGCGCTG
CTCACGCGGG TGGGGTCGGT CCAGGCGGCC TGCCTCGACT GCCGCGCCTA TCTGCCTGCC
ATCCCGCGGC CGGGCAAGCG CGAGGCGCAG GGCTTTCTTG CGACGCTGGC GATGTTGTTG
AAATAA
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| Protein sequence | MTDSTATTPN DPAGPWAIPV RRPLPGEDKP RSTTSFPRKV WKLLVAIKDA LALIFLLLFF
VALFGLLAGR PNAGLPVSEG ALLIELDGIV TEQPTETDPF AALSGGPQLK EIRTRDVVHA
LETAASDKRI TSVVLDLDRF LGGGQVSLAE IGGAIDKVRA KKKPVLAFAT AYTTDSYQIA
AHASEIWADS IGGVAIAGPG GSRLYYKGLM DRLGITANIY RVGTFKSAVE PYLRSDQSPE
AKEANLAYAS VLWDNWLADV KKARPAAKLD AYIADTVGAV RAAGNDLSKA SLDAGLVDRL
GSRMAFSRRV AEISGATDEG KPWEFNAIPL ENWVAANPPA EKGSAIAVVP VVGDIVDGEA
PTGLAGGTTI AEHILDAATD SSVKAIVLRV DSPGGSVLAS EEIRQALLAA KARKLPVVVS
MANVAASGGY WISTPADRIF AEPETITGSI GVFGILPSFD RALAKIGVNA DGIATTPLSG
QPDIFGGVNE EFNALAQASV EDVYTRFTGL VAKSRKQPLD KILPIAEGRV WAGGTARQLG
LVDQFGGLPE ALAAAAKLAK VEGDFHARYF EEEPSELSRL LANWSGAGEE ETAALPRGWF
GIAAMNRQLT ERRLVQDLAL LTRVGSVQAA CLDCRAYLPA IPRPGKREAQ GFLATLAMLL
K
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