Gene Sala_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2208 
Symbol 
ID4080166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2319973 
End bp2320194 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content64% 
IMG OID638010586 
ProductXRE family transcriptional regulator 
Protein accessionYP_617250 
Protein GI103487689 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0421873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGC CGCCCTTTGC CAACGACATT CGGACGCTGC GCTTTCTGGC GGGCGAAATG 
ACGCAGGCCG AGCTTGGCGA GCGCGTCGGG GTGACGCGGC AGACGATCGC GGCGATCGAG
CAGGGCAAAT ACTCGCCCTC GCTCGAAGTC GCCTTCCGTA TCGCGCACGT GTTCGGAAAA
CCGCTCGAGG CCGTGTTCCA GTGGAATGAC GGTCGCGACT GA
 
Protein sequence
MAKPPFANDI RTLRFLAGEM TQAELGERVG VTRQTIAAIE QGKYSPSLEV AFRIAHVFGK 
PLEAVFQWND GRD