| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2198 |
|---|
| Symbol | |
|---|
| ID | 4080156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2310443 |
|---|
| End bp | 2311189 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638010576 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617240 |
|---|
| Protein GI | 103487679 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1801] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.389644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.68785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCC ACATCGGTAT CGGCGGCTGG ACCTATGAAC CGTGGCGCGG CACTTTCTAT
CCGCCGAAGC ATCCGCAAAA GCGCGAGCTC GAATATGCCG GCCAGCATCT GACCGGCATC
GAAATCAACG GCACCTATTA TGGCAGCCAG AAACCCGAAA GCTTTGCGAA CTGGGCCGCG
TCGGTCCCCG ACGGCTTCAG GTTCAGCGTC AAGGCGTCAC GTTTCTGCAC CAACCGCAAG
GTGCTGAAGG ACGGCGCCGC CTCGATCGGG AAGTTTCTCG GTCAAGGGCT GACGCAGCTC
GGCGACCGGC TCGGCCCGAT CCACTGGCAG TTCATGGCGA CCAAACAGTT CGACCGTGAC
GATTTTGCGG GTTTCCTCGA CCTGCTGCCC GACAGCCAGG ATGGCCTTCC CCTGCGCCAC
GCGATCGAGG TGCGGCATGA AAGTTTCCGC GATCCGGCGT TCATCGACCT GCTGCGCGCG
CGCAACATGG CGGTCGTCTA CGCCGACAGC GACGAGTTTC CGTGCATCGA CGAACAGACC
GCCGATTTCA CTTACGCGCG CCTCCAGCGC AGCCGCGAGG AGGTGGAAAC CGGCTATGAC
GCGGCGGCTC TCGACCAATG GGCAAAGCGG GTGCGCGACT GGGCCGCGGG CGACCGCGAC
GTCTTCCTCT TCTTCATCGC CGGAGCCAAG GTCCGCAACC CGGCGGCGGC GCAGGCGCTG
ATCGCGCGGC TGCGCGACAG CGGCTGA
|
|---|
| Protein sequence | MSIHIGIGGW TYEPWRGTFY PPKHPQKREL EYAGQHLTGI EINGTYYGSQ KPESFANWAA
SVPDGFRFSV KASRFCTNRK VLKDGAASIG KFLGQGLTQL GDRLGPIHWQ FMATKQFDRD
DFAGFLDLLP DSQDGLPLRH AIEVRHESFR DPAFIDLLRA RNMAVVYADS DEFPCIDEQT
ADFTYARLQR SREEVETGYD AAALDQWAKR VRDWAAGDRD VFLFFIAGAK VRNPAAAQAL
IARLRDSG
|
|---|
| |