Gene Sala_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2188 
Symbol 
ID4080222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2299482 
End bp2299970 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content61% 
IMG OID638010566 
Producthemerythrin HHE cation binding region 
Protein accessionYP_617230 
Protein GI103487669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA CCAGAATCTT TGCGCGGCTG AAAGCCGATC ACGATCGCCA CCGCGAGCTG 
CTCGACAAGA TCGACGCGAC CCACGGCGAC AGCGATGAGC GCCGGACGCT GTTCGAGGCG
TTCCGCGTCG AGGTGACGGC GCACGCCGCG TCGGAGGAAA TGTCGCTCTA TGCGACGATG
CTCGCCGACC CCGACCTGCG CGACGAGGCG CAGCACAGCG TTGCCGAGCA TAAGGAGATC
GAGGATTTCC TGACCGAATT ATACGAGATG GATTTTGCGT CGAGCGGCTG GCTGACGCGC
TTCCGCACGA TGAAGGACCG TTACCTCCAC CATATCGACG AGGAGGAGCA AGAGATGTTC
CCCGCGGCGG AAAAGGACTT GTCCGACGCG CGCAAGAAGG AACTGATCAA GATTTTCGAA
AAGGAAAAGC CGAGGGAAAA GGCCAAGGCG GCCGAAGAGG AGCCTTCAAG CGAACACGCG
CGGGATTAG
 
Protein sequence
MAETRIFARL KADHDRHREL LDKIDATHGD SDERRTLFEA FRVEVTAHAA SEEMSLYATM 
LADPDLRDEA QHSVAEHKEI EDFLTELYEM DFASSGWLTR FRTMKDRYLH HIDEEEQEMF
PAAEKDLSDA RKKELIKIFE KEKPREKAKA AEEEPSSEHA RD