Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2176 |
Symbol | |
ID | 4080210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2285973 |
End bp | 2287181 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638010554 |
Product | permease YjgP/YjgQ |
Protein accession | YP_617218 |
Protein GI | 103487657 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.668049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATAAGC TGCCTGCCAT CGACCGCTAC ATCGCGCGGC TCATCTTTTT TCCCATGGTC GGCACGCTCG TGCTGTCGGC GATGCTGCTC GTGCTCGAAA AGATGCTGCG TCTGTTCGAC TTTGTCGCGA CCGAAGGCGG CCCGGTGAGC GTCGTGTGGC GGATGCTCGC CAACCTGATC CCCGAATATC TCTCGCTGGG CATCCCGATC GGGCTGATGC TGGGGATTCT GCTGGCTTTC CGCAGGCTTG CGACATCGAG CGAGCTCGAC GTGCTGAAGG GCGTCGGCAT GAGTTTCGGG CGGCTGATGC GGATGCCCTA TGTCTATGCG GTCGGCCTCG CCGCGCTCAA CCTTGCGATC GTCGGCTTCA TCCAGCCCTA TGCCCGCTAT GCCTATGAAG GTTTGCAGTT CGAGCTCCGA TCGGGCGCGC TCGGCGCGTC GATCAAGGTC GGCGAATTCA CCCGGCTGGG CGAGCGGATG ACGCTGCGCA TCGAGGAAAG CTATAATGAA GGCCGATCCC TGCGCGGCAT TTTCGTGCGC GGCGAACAGC GCGACGGGCA ACGCGTGTCG GCGACCGCGT CGCGCGGGCA GTTCCTGGCG ACCGACGACC CTGAAACGAT CATCCTGCGC CTGTCGCAAG GGGTGCTGAT CCACGAATCG CCCAAATTCG CGGTGCCGCG CGTGCTGACC TTTGACAATC ACGACCTGCC GATCCCGCTG CCCAGGATCG AGGCGTTCCG CCTGCGCGGC GGCGCCGATC GCGAAATGAC GATCCCGGAA CTGTTCGTCG CGGGCAAGGA CCGCCGCCAG TCCGAACAGA CGCGGCTCGA ATCGCGCGCC AATTTCCACT TCCGCATCGT CGAGGTGATG TCGATGTTCC TGATCCCGCT GATCGCGGTC GCGCTCGCGG TGCCGCCCAA ACGGTCGACC TCGTCGCTCG GCGTTTTCCT GTCGATCGTG CTGCTCGTCA CCCAGCACAA GATCAACCAA TATGCCGAGG ATCTGGGCGC GCGCGGCGCG GTCGATCCGC TGATCGCGCT CTGGGTGCCC TTCCTCCTCT TCGCGGCGCT CGCGATCTGG ATGTATTATA CGATCGCGCA CGTCCCCGGT GGCCAGCCGA TCGGCGCGCT CGAGCGCGTC GCGGCGAAGG GCGCGGAGCG GCTCCGCGGC CTCGTCCGTC TGTTCCAGCG TGAGCGAAGG CCGGGCTGA
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Protein sequence | MNKLPAIDRY IARLIFFPMV GTLVLSAMLL VLEKMLRLFD FVATEGGPVS VVWRMLANLI PEYLSLGIPI GLMLGILLAF RRLATSSELD VLKGVGMSFG RLMRMPYVYA VGLAALNLAI VGFIQPYARY AYEGLQFELR SGALGASIKV GEFTRLGERM TLRIEESYNE GRSLRGIFVR GEQRDGQRVS ATASRGQFLA TDDPETIILR LSQGVLIHES PKFAVPRVLT FDNHDLPIPL PRIEAFRLRG GADREMTIPE LFVAGKDRRQ SEQTRLESRA NFHFRIVEVM SMFLIPLIAV ALAVPPKRST SSLGVFLSIV LLVTQHKINQ YAEDLGARGA VDPLIALWVP FLLFAALAIW MYYTIAHVPG GQPIGALERV AAKGAERLRG LVRLFQRERR PG
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