| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2160 |
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| Symbol | |
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| ID | 4080194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2271219 |
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| End bp | 2272421 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010538 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_617202 |
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| Protein GI | 103487641 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0650836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.851382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCA CGATCCCGAC CGCCGCCCCG ACTGCCGCCG CAAAGGCGGC GCGCGCCAAA
ACCGATGCCG CCACCAGCAA TCCGCTCGCC GACATGCGCG ACTGGTGGGA CAGCAGCGTC
GCCTGGGTGA ACAGCCACTG GCTGGAAATC GGGATCGCGG TGGCGCTTGG CCTCGTCATC
TATGTCCTGC TCTCGATGAT CCGCCGTATC GCGCTGAGGC GCGCGCAGGC GGCGCCGGGC
GAGTTCACGC TCACCGACAT CGTCGGCCGC GTGATCCACA AGACGAAGTC GCTCGTGCTG
GCAATCATCG CCGTGCGGCT GGTCGCGGGT TATGCGCAGC CGCCGGCCCT GTTCATGCAG
GCCATCCATT TCGCCTTCAC CGTCGCCGTC GTGTTGCAGG CCGCGATATG GGCACGCGAA
ATCATCCTCG GCCTCATCCA GCGCCGCGCT GCCGAAGGCC ATAATGAAAC GCTCAGCAAC
GCGATGGGAA TCATCCGGCT GCTCATCAGC GTCGCACTTT TCGCGGTCGC CGCCATCGTC
ATCCTCGACA ATATGGGGGT CAATGTCACC GGGCTGGTCG CGGGCCTCGG CATCGGCGGC
ATCGCGATCG GCCTTGCCGC GCAGGGCATT TTTTCCGATC TGTTCGCGTC GCTGTCGATC
ATCTTCGATC GGCCGTTCCG CGTCGGCGAG ACGATCAAAT ATGACACGAG CACCGCAACC
GTCGAACGGA TTGGCCTGAA AAGCACGCGC CTGCGCTCGA TAAACGGCGA GTTGCTCGTC
ATTTCGAACA CCAATCTGCT CGCCAAGGAA ATCACCAATT ACGCGCATCT GCACCGCCGC
CGCGTGACCT TCATGATCGG CGTCGTCTAT CAGACCACGC CGACGATGCT GCGCGACCTT
CCTGCGCTGC TCGAGGAGCA GGTGAACGCC GCAGGCCATG CGTTTGTTCG TTCCAGCTTT
GTCGCTTTCG GCCCGTCCAG CCTCGACTTC GAACTGCTCT TCGACGTGTT CAGCGATGAT
TATGACGTCG TGACCGCCGC GCGCACCGAC GTCGCGATCC GCCTGTTCGA AGCGATGACC
GCGGCGGGTT ACAGCTTTGC CTATCCGACG CAGACAACCT TCACCGCGGC GCCCGACGGC
CGCATGATTC TCCCCTATGC CGAAAGCGTG ACGATGAAGG CGCCAGACCC TGCCGATGGC
TGA
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| Protein sequence | MTVTIPTAAP TAAAKAARAK TDAATSNPLA DMRDWWDSSV AWVNSHWLEI GIAVALGLVI
YVLLSMIRRI ALRRAQAAPG EFTLTDIVGR VIHKTKSLVL AIIAVRLVAG YAQPPALFMQ
AIHFAFTVAV VLQAAIWARE IILGLIQRRA AEGHNETLSN AMGIIRLLIS VALFAVAAIV
ILDNMGVNVT GLVAGLGIGG IAIGLAAQGI FSDLFASLSI IFDRPFRVGE TIKYDTSTAT
VERIGLKSTR LRSINGELLV ISNTNLLAKE ITNYAHLHRR RVTFMIGVVY QTTPTMLRDL
PALLEEQVNA AGHAFVRSSF VAFGPSSLDF ELLFDVFSDD YDVVTAARTD VAIRLFEAMT
AAGYSFAYPT QTTFTAAPDG RMILPYAESV TMKAPDPADG
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