| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2138 |
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| Symbol | |
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| ID | 4080135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2241517 |
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| End bp | 2242959 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010516 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_617180 |
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| Protein GI | 103487619 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit
[TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCCG AACGCATGCT CCAGTTTGTG GGGCGTGAAC AATCCTATCC GGACAAGCGC
TCGCCCGAGG AGCGCGCGCG CGACTTTCGC GAGATCGCCG AGCGCTATTC GGCGCCCGAT
GCCGACGCGC AGGCGGCGCG CTGCTCGCAA TGCGGCGTGC CCTATTGCTC GGTGCATTGC
CCCTTGCACA ACCACATCCC CGACTGGCTG CGCCTGACCG CCGAGGGCCG GCTGCGCGAG
GCCTATGAGC TGAGCAACGC GACCTCGACG ATGCCCGAGA TCTGCGGCCG CATCTGCCCG
CAGGACCGCC TGTGCGAGGG CAATTGCGTC ATCGAATTTT CAGGGCATGG CGCGGTGACG
ATCGGCAGCG TCGAAAAATA TATCACCGAC ACCGCCTGGG CCGAGGGCTG GGTCGAACCG
TTGCGCGTCG GCCCGGCGAC CGGCCAGTCG GTCGGCGTGA TCGGCGCGGG CCCCGCGGGC
CTCACCGCCG CCGAATATCT GCGCGCCGCT GGGCACGACG TGCATGTCTA CGACCGCCAC
GACCGCGCGG GCGGGCTGCT GACCTATGGC ATCCCCGGCT TCAAGCTGGA GAAGGATGTG
GTGATGCGCC GCATCGACCG GCTGGCGGCG GGCGGCATCC AGTTCCACCT GGGGTTCGAG
GTCGGCAAGG ACGCGACGCT CGACGGGCTG CGGCAAAAGC ATGACGCGAT CCTGATCGCG
ACCGGCGTGT ACAAGGCGCG CGAGATCAAC GTCCCCGGCA ACGAGGCCGA AGGCGTGATC
GCCGCGCTCG ACTATCTGGT CGCGTCGAAC CGCAAGGGTT TCGGCGATGC GGTTCCCGCC
TTCGACGACG GCCGCCTGAA CGCCGCAGGC AAGCATGTCG TCGTGATCGG CGGCGGCGAC
ACCGCGATGG ACTGCGTCCG CACCGCGGTG CGGCAGGGTG CCAGGTCGGT GAAATGCCTC
TATCGCCGCG ACCGCGAAAA TATGCCGGGG TCGCAACGCG AGGTCGCCAA TGCCGAAGAG
GAAGGCGTCG AGTTCGTGTG GCTCTCCGCT CCCGAAAGCT TCACCGCCGA CAGGCATGTC
AAAGAGGTCG CGGTCGCAGG GATGCGGCTT GGCGCCCCCG ATGCGAGCGG CCGCCGCAGC
CCCGAGGTCG ATCCGGGGCG CAGGTTCGAC GTCCCCGCCG ACATGGTGAT CAAGGCACTG
GGCTTCGATC CCGAGGAATT GCCGCACCTG TTCGGCGCCC CCGACCTCAG CGTCACGCGC
TGGGGCACGC TGCGCGTCGA TCACCAGACG ATGATGACCA GCCTGCCCGG CGTGTTCGCC
GCCGGCGACA TCGTGCGCGG CGCCAGCCTG GTGGTGTGGG GAATCCGCGA CGGCCGCGAC
GTCAGCGACC AGATGGCAAA GTGGTTGAAG GCGAAAGCGA AAAGCGAAAA GAAGGCAGCA
TGA
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| Protein sequence | MVSERMLQFV GREQSYPDKR SPEERARDFR EIAERYSAPD ADAQAARCSQ CGVPYCSVHC
PLHNHIPDWL RLTAEGRLRE AYELSNATST MPEICGRICP QDRLCEGNCV IEFSGHGAVT
IGSVEKYITD TAWAEGWVEP LRVGPATGQS VGVIGAGPAG LTAAEYLRAA GHDVHVYDRH
DRAGGLLTYG IPGFKLEKDV VMRRIDRLAA GGIQFHLGFE VGKDATLDGL RQKHDAILIA
TGVYKAREIN VPGNEAEGVI AALDYLVASN RKGFGDAVPA FDDGRLNAAG KHVVVIGGGD
TAMDCVRTAV RQGARSVKCL YRRDRENMPG SQREVANAEE EGVEFVWLSA PESFTADRHV
KEVAVAGMRL GAPDASGRRS PEVDPGRRFD VPADMVIKAL GFDPEELPHL FGAPDLSVTR
WGTLRVDHQT MMTSLPGVFA AGDIVRGASL VVWGIRDGRD VSDQMAKWLK AKAKSEKKAA
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