Gene Sala_2112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2112 
Symbol 
ID4080087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2220222 
End bp2220806 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID638010488 
Producthypothetical protein 
Protein accessionYP_617154 
Protein GI103487593 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.10948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC CGTCACCTTC GCTTTCCAGC GACTTTGCAC AGCTTTCGCT CGCCGAAGTT 
GCCGAGCGGT TCGCGGCGCA GACGCTGCCG CCGGTCGAAA GCTGGCATCC CGAACGCAGC
GGCGACAGCG CGATGGAGAT CCGCGCCGAC GGCAGCTGGT ATCACGAGGG CGGACGGATC
AACCGGCCGG CGATGGTCAG GCTTTTCTCG ACGATTCTGC GGCGCGAGGC CGACGGCAGC
CACGTCCTCG TCACCCCGGC CGAAAAGCTC GCCATCGCGG TCGAGGACAC GCCCTTTCGC
GCGGTCGAGA TGAAGAGCGA AGGCGAGGGG GCGGCGCGCA AACTCGTCTT TCGCCTCGAC
ACCGACGACC TCGTGCTTGC GGGCCCGGAC CATCCGCTGT CCTTCGGCAG CGACCCCGAC
CGCCCCGACC CGCGGCTGCA TGTGCGCGGC ACCATCGGCA ACGGGCTCGA GGCGCGCATC
GACCGCGCGC TTTATTACGA AATCGTCGAG ATGGCGCTCG CCGGGGGTGA CGATCCGCCC
GTGATATGGT CGAATGGCGC GCAATTTCCC CTGGTCGATC GCTGA
 
Protein sequence
MIGPSPSLSS DFAQLSLAEV AERFAAQTLP PVESWHPERS GDSAMEIRAD GSWYHEGGRI 
NRPAMVRLFS TILRREADGS HVLVTPAEKL AIAVEDTPFR AVEMKSEGEG AARKLVFRLD
TDDLVLAGPD HPLSFGSDPD RPDPRLHVRG TIGNGLEARI DRALYYEIVE MALAGGDDPP
VIWSNGAQFP LVDR