Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2112 |
Symbol | |
ID | 4080087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2220222 |
End bp | 2220806 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638010488 |
Product | hypothetical protein |
Protein accession | YP_617154 |
Protein GI | 103487593 |
COG category | [S] Function unknown |
COG ID | [COG3816] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.10948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCC CGTCACCTTC GCTTTCCAGC GACTTTGCAC AGCTTTCGCT CGCCGAAGTT GCCGAGCGGT TCGCGGCGCA GACGCTGCCG CCGGTCGAAA GCTGGCATCC CGAACGCAGC GGCGACAGCG CGATGGAGAT CCGCGCCGAC GGCAGCTGGT ATCACGAGGG CGGACGGATC AACCGGCCGG CGATGGTCAG GCTTTTCTCG ACGATTCTGC GGCGCGAGGC CGACGGCAGC CACGTCCTCG TCACCCCGGC CGAAAAGCTC GCCATCGCGG TCGAGGACAC GCCCTTTCGC GCGGTCGAGA TGAAGAGCGA AGGCGAGGGG GCGGCGCGCA AACTCGTCTT TCGCCTCGAC ACCGACGACC TCGTGCTTGC GGGCCCGGAC CATCCGCTGT CCTTCGGCAG CGACCCCGAC CGCCCCGACC CGCGGCTGCA TGTGCGCGGC ACCATCGGCA ACGGGCTCGA GGCGCGCATC GACCGCGCGC TTTATTACGA AATCGTCGAG ATGGCGCTCG CCGGGGGTGA CGATCCGCCC GTGATATGGT CGAATGGCGC GCAATTTCCC CTGGTCGATC GCTGA
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Protein sequence | MIGPSPSLSS DFAQLSLAEV AERFAAQTLP PVESWHPERS GDSAMEIRAD GSWYHEGGRI NRPAMVRLFS TILRREADGS HVLVTPAEKL AIAVEDTPFR AVEMKSEGEG AARKLVFRLD TDDLVLAGPD HPLSFGSDPD RPDPRLHVRG TIGNGLEARI DRALYYEIVE MALAGGDDPP VIWSNGAQFP LVDR
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