Gene Sala_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2081 
Symbol 
ID4080018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2186256 
End bp2186903 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID638010456 
ProductDSBA oxidoreductase 
Protein accessionYP_617123 
Protein GI103487562 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.507156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGA CCGCTGACCT TTTCTGGTCC TTTCGCTCGC CGTACAGCTA TCTCGCGGTC 
GGCCGCTATC GCGCGCTCGC CGCGAGCCAT GACGTGACGA TCAACCTGCG TCCCGTCTAT
CCGCTCGCGA TCCGCCAGCC CGATTTTTTC GAGCGCAATC ATCCCAACTG GCTGAGCTAT
ACGATGCGCG ACATGATCCG TGTCGCGCAG TTTCACGGCA TTCCTTTCGG CCCGCCGCGC
CCGGACCCGA TCGTGCAGGA CGTGCGGACG CGCGCGATCG CCGAGGAGCA GCCGCATATC
TATCGTCTCA CGCGACTGGG GCAGGCGGCG GCGCGGCGCG GCAAGGGACT CGCCTTTGCG
CATGAAGCGG GGCAGATTAT CTGGGGAGGC GCGGTGGACT GGCACATCGG CGATCATCTG
GCGGGCGCGG CGCGCCGTGC CGGACTCGAT CTCGCTGAAC TGGAAATCGA GGCCGTCGAC
GATGCCGTGG CGCTCGACAA TGAGATCGCG GCCAACCAGG TCGCGCTGGA GATTGCGGGG
CATTGGGGCG TACCGACTTT GGTGTTCGAG GGCGAACCCT TTTTCGGGCA GGACCGCATC
GAAATGGCGA AATGGCGGAT GGAGCAAAAG GGGTTGCGCC CGTGTTAG
 
Protein sequence
MTLTADLFWS FRSPYSYLAV GRYRALAASH DVTINLRPVY PLAIRQPDFF ERNHPNWLSY 
TMRDMIRVAQ FHGIPFGPPR PDPIVQDVRT RAIAEEQPHI YRLTRLGQAA ARRGKGLAFA
HEAGQIIWGG AVDWHIGDHL AGAARRAGLD LAELEIEAVD DAVALDNEIA ANQVALEIAG
HWGVPTLVFE GEPFFGQDRI EMAKWRMEQK GLRPC