Gene Sala_2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2070 
Symbol 
ID4080006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2178296 
End bp2178889 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content62% 
IMG OID638010444 
Producthypothetical protein 
Protein accessionYP_617112 
Protein GI103487551 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.237488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.473197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC CGCTTTCCGA CAGCGCTCTC GACCAGCTTT TTCGCACCGC GCGCACCTAT 
AACGGCTATC TCGACAAGCC GGTGTCGGAG GCGCAGCTGC ACGCCATCTG GGATCTGATG
AAGTTCGGGC CGACGAGCGC GAACAGCCTG CCGGCGCGGA TCGTCTGGTG CATGTCGGAT
GCGGCGAAAG AGAAGCTCGC GGCGCACGCG ATGCCCGCCA ATGCCGAAAA GATCCTCGCC
GCGCCGGTTA CCGCGATCAT CGCCATGGAC CTTGAGTTTT ACGAACATTT GCCCGAGTTT
TTCCCGCACA CCGACGCGCG CAGCTGGTTT GCGGGCAAGG ATGCGCTTGC CGAGACGACC
GCCTTCCGTA ATTCGAGCCT GCAGGGCGCC TATTTTCTGC TCGCGGCGCG TGCGCTCGGG
CTCGATACCG GCCCGATGTC GGGGTTCGAC AATGACGCGG TCGACAAGGC CTTCTTTGCC
GATCAACCGA AGGTGAAGAG CAATTTCATC TCGACGCTCG GCTATGGCGA TCCCGCGACG
ATCTTCGACC GCAGCCCGCG GCCGGACTTT GATCGCTTCA ACCGCCTTGT CTGA
 
Protein sequence
MSEPLSDSAL DQLFRTARTY NGYLDKPVSE AQLHAIWDLM KFGPTSANSL PARIVWCMSD 
AAKEKLAAHA MPANAEKILA APVTAIIAMD LEFYEHLPEF FPHTDARSWF AGKDALAETT
AFRNSSLQGA YFLLAARALG LDTGPMSGFD NDAVDKAFFA DQPKVKSNFI STLGYGDPAT
IFDRSPRPDF DRFNRLV