Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2044 |
Symbol | |
ID | 4079941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2153741 |
End bp | 2155585 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638010418 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_617086 |
Protein GI | 103487525 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.153512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATCATC CGCTTTCCGT CCCCGTCAGC CGCCGCCACA CGCTCGCCGC CCTTGGCGCG GGCACCGCGG GCATTGCCCT CGCCGGCCCC GCCGCGGCGT TGCAGGACGC GCCCGGCAGC GGCGCGCAGC TCCTGCTCGA TTCGGTCGCC GACAATCTGC TCGCCCACTC GCCCGAAGGC GCAACCTCGC TCGGCATCGA CACCGGCGCG CGCGCGGCGA TGCGCGGCAA GCTGGCGGAC CGTTCGGCCG CGGGGGTGGC GGCGCTCGCC GACACGCTCA AAGCCGACGT CGCGCGCGTC CGCGCCTTCG ACAAGGCGGG GCTCGACCAT CAGGCGCGCA CCAGCCTCGC CGTCGTCGAA AGCGCCTATG ACGTCGCGCT CGCGGGCTTT GCGCTGCCCT ATGGCGACGT CGCGGTCGGC GGCTGGCGCA ACACCCCCTA TGTGGTGATC CAGAATGTCG GCGCCTATCT CGACATTCCG AAGTTCCTCG ACAGCGACCA TCCGGTGAAG ACGTCGGCCG ACGCCGAGGC CTATCTCGCG CGCCTCGGCG CCTTTCCCGG CGTGCTCGAC GGCGAGACCG AACGGATGAA GGCCGCGGCC GCGCAGGGGC TGATCGCCCC CGCCTTCCTG ATCGACAAGG CGGTGGGGCA GATGGAGGCG AGCCTCGCAG ATGCGAAGGC GGGCGGGTCG ATGGTCGAAA GCCTGAACCG CCGCGCGGCC GCCGCCGAGC TGAACGGCGA CTGGGGCGCG CGCGCGGCGA AGATCGTGCA GGGTCCGGTC GCCGCCGCGC TCGAACGCCA GCTCGCCGAG ATGAAGGCGC AGCGGCCGAA GGCGACGATG GACGCGGGCC TGTGGGCGCG CCCCGGCGGC GACGAATGGT ATGCGTGGGG GCTGCGCGCC TCGACCACCA CGCGCATGAC CCCCGACGAG ATTCACGAAA TGGGGCGGCA GGAGCTGGCC GAACTCCACG GCCGCATGGA CCCGATCCTG AAAAAGCTGG GCTATACGCA AGGCAGCGTC GGCGACCGGA TGAACGCGCT CGCCAGGGAT CCGCGGTACA AATTTCCCGA CAATGATGCG GGCCGCGCCG AAATCCTCGC CTATATCCAG ACCTGGCTCG GCAAGATCCG CGCCGAACTG CCGCGCGCCT TCCGCACCCT GGTGAAGGGC AATGTCGAGG TGAAGCGGCT GCCGCTCGCC GAGGAACCCG GCGCGCCCGC CGCCTATGGC GGCGCGGGGT CGATCGACGG CAGCATTCCG GGACGTTTCT GGATCAACCT GCGCACCACC GAACTGCACA GCAAATACTC CCTCCCCGAC CTCACCATGC ACGAGGCGAT CCCCGGCCAC GCCTGGCAGG GCGAATATGC GCATTCGATG CCGCTGATCC GCACGATGCT GGCGTTCAAC GCCTATTCGG AAGGCTGGGC GCTTTACGCC GAACAGCTCG CCGACGAGCT GGGCCTCTAT GACGATTTCG AGGTCGGGCG CCTCGGCTAT CTCCAGTCGC TCGCCTTCCG CGCCTGCCGC CTCGTCGTCG ACACCGGGCT GCACGCGAAA CGCTGGACGC GCGAGCAGGG CGTGCGCTTT TTCGTCGAGG AAAATGGCTC GAACCCGCTT GAGGTCGCGA GCGAGGTCGA CCGCTATTGC AGCTGGGCGG GACAGGCGTG CGGATACAAG GTCGGGCACA GCGAGATCGT GCGGCAACGC GGGCTGGCGC AGGCGGCGCT GGGTGCCCGC TATGACCTGC GCGATTTCAA CGACGTGGTG CTGAAGGGCG GCAACGTCCC GCTCGACGTG CTCGCGCTGA ACGTCGCGGA ATATGTAGCC GGGGCGAAAG GGTAG
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Protein sequence | MHHPLSVPVS RRHTLAALGA GTAGIALAGP AAALQDAPGS GAQLLLDSVA DNLLAHSPEG ATSLGIDTGA RAAMRGKLAD RSAAGVAALA DTLKADVARV RAFDKAGLDH QARTSLAVVE SAYDVALAGF ALPYGDVAVG GWRNTPYVVI QNVGAYLDIP KFLDSDHPVK TSADAEAYLA RLGAFPGVLD GETERMKAAA AQGLIAPAFL IDKAVGQMEA SLADAKAGGS MVESLNRRAA AAELNGDWGA RAAKIVQGPV AAALERQLAE MKAQRPKATM DAGLWARPGG DEWYAWGLRA STTTRMTPDE IHEMGRQELA ELHGRMDPIL KKLGYTQGSV GDRMNALARD PRYKFPDNDA GRAEILAYIQ TWLGKIRAEL PRAFRTLVKG NVEVKRLPLA EEPGAPAAYG GAGSIDGSIP GRFWINLRTT ELHSKYSLPD LTMHEAIPGH AWQGEYAHSM PLIRTMLAFN AYSEGWALYA EQLADELGLY DDFEVGRLGY LQSLAFRACR LVVDTGLHAK RWTREQGVRF FVEENGSNPL EVASEVDRYC SWAGQACGYK VGHSEIVRQR GLAQAALGAR YDLRDFNDVV LKGGNVPLDV LALNVAEYVA GAKG
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