Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2002 |
Symbol | |
ID | 4082167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2111214 |
End bp | 2112320 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638010378 |
Product | Phage portal protein, HK97 |
Protein accession | YP_617046 |
Protein GI | 103487485 |
COG category | [S] Function unknown |
COG ID | [COG4695] Phage-related protein |
TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.443505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.004041 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACTGGT TTGGCCGGAA GGCTGCGCAG GGGGCTGCGC GGCCCGCTTT GTCGCGGGTG TATGGGAGCT GGTCGGCGCC TGCGCCGCTG TCGTGGGAAG CGCAGGTGCG CGAGGGGTAT CTGGCGAATG CGATCGTGCA GCGCAGCGTG CGGCTGGTGG CCGAGGCGGC GGCGAGTGCG CCGCTGGAGG CGAGCGATCC GGGGCTCTTG GCGCTGGTTT CGGCGACGTC GGGCGGGCAG GGGCTGCTTG AGACGCTGGC GTCGCACCTG TTGCTGCACG GCAATGGCTA TGTGCAGATT TTGACCGATG GCGCGGGGGC GCCGGCCGAG CTGTTCGCGC TGCGCCCCGA GCGGGTGACG GTCGAGGCCG ACGCGCGCGG GTGGCCGGTG GCCTATCGCT ACAAGGCGGG CGGGTCGGCG GCGGTCCTGC CCGCCGAGGA TGGCGCGGGG CGCGTCGCGG TGGTGCATGT GAAGGCGCTG CATCCGCTCG ACGATCATTA TGGCGCGGGG TGCCTGGGCG CCGCGGCGGG GGCGATCGCG GCGCATAATG CGGCGGCGAA GTGGAATGCG GCGCTGCTGG AGAATGCGGC GCGGCCGTCG GGGGCGCTGG TCCATGATCC GGGCGACAAG GGGATGCCGC TGTCGGCCGA GCAGGTCGAG CGGCTGCGCG AGGAACTGGC CGAGAGTTTT TCGGGGCGTG CCAATGCCGG GCGGCCCTTG CTGCTGGAGG GTGGCCTCCG GTGGCAGGCG CTGTCGCTGT CGCCCGCCGA GATGGATTTC CTGGCGCTGA AGGATTCGAG CGCGCGCGAG ATTGCGATGG CGTTCGGGGT GCCGCCGATG CTGCTGGGGC TGCCGGGGGA CGCGACCTAT GCCAATTATC GCGAGGCCAA TCGCGCGCTG TGGCGGCTGA CGGTGCTGCC TTTGTGCGCC AAGATATTGG GGGCGATCGC GCAGGGGCTG TCGGGCTGGT TCGACGGCGC CGAGCTGCGC GTCGACCTCA ACAAGCTGCC CGCGCTGGCC GAGGACCGGA TGGCGCTGTG GCGCGAGGTG TCGGGTGCCG ACTGGCTGAG CGCGGACGAG AAGAAGGCGC TGCTGGGGGT GGCGTAG
|
Protein sequence | MNWFGRKAAQ GAARPALSRV YGSWSAPAPL SWEAQVREGY LANAIVQRSV RLVAEAAASA PLEASDPGLL ALVSATSGGQ GLLETLASHL LLHGNGYVQI LTDGAGAPAE LFALRPERVT VEADARGWPV AYRYKAGGSA AVLPAEDGAG RVAVVHVKAL HPLDDHYGAG CLGAAAGAIA AHNAAAKWNA ALLENAARPS GALVHDPGDK GMPLSAEQVE RLREELAESF SGRANAGRPL LLEGGLRWQA LSLSPAEMDF LALKDSSARE IAMAFGVPPM LLGLPGDATY ANYREANRAL WRLTVLPLCA KILGAIAQGL SGWFDGAELR VDLNKLPALA EDRMALWREV SGADWLSADE KKALLGVA
|
| |