Gene Sala_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1977 
Symbol 
ID4081021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2084556 
End bp2084951 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content70% 
IMG OID638010353 
Producthypothetical protein 
Protein accessionYP_617021 
Protein GI103487460 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.284202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA AATCCCTTTC CGAACGCATC GGCGACCTTG GCCGCCGCCT CGCGGTCGAG 
GCGCACACCG CCTGGCTCGC CGCGCGCGAC CCGCGCGTGG CGTGGTTCGC GCGGCTGCTG
GCGGTCGCGG TCGCCGCCTA TGCGCTCTCG CCGATCGACC TCATCCCCGA TTTCATCCCC
GTGCTCGGCT GGATCGACGA CCTCGTCATC CTGCCGCTCG GCCTGCTCGC GGTGCGGCGT
CTGATCGCCG CGCCCTTGTG GTCCGAACTC CACGCCTTGG CCGAAACGGC GAGCGAGCGG
CCCTCAAGCC GGGCGGGCAT GATCCTGATC CTGCTTATCT GGGCCGCCCT GCTCGCCATC
GTCTATTGGG CGGTGCGCAC CTCGCCGCTG CATTAG
 
Protein sequence
MTGKSLSERI GDLGRRLAVE AHTAWLAARD PRVAWFARLL AVAVAAYALS PIDLIPDFIP 
VLGWIDDLVI LPLGLLAVRR LIAAPLWSEL HALAETASER PSSRAGMILI LLIWAALLAI
VYWAVRTSPL H