| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1953 |
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| Symbol | |
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| ID | 4080502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2060102 |
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| End bp | 2061187 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010330 |
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| Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
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| Protein accession | YP_616998 |
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| Protein GI | 103487437 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.667099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTGGGGC CGCTCGTGTT CGTCCACGAA TATGGCCATT ATATCGTCGG CCGCTGGTGC
GGGGTGAAGG CGGAAACCTT CTCGATCGGG TTCGGGCGCA AGCTCGTCGG CTGGACCGAC
AAGCGCGGCA CCGAATGGAA GATCGGCTGG CTGCCGCTGG GCGGCTATGT CCAGTTCGCG
GGCGACCGCG ATGCCGTCAG CCAGCCCGAC GCCGAATGGC AATCCCTGCC CGCCGAGGAA
CGATCGCACA CCTTTCCCGC GCAGCCGGTG TGGAAACGCG CCGCGATCGT CGCGGCGGGG
CCGGTCACCA ATTTCCTGTT CGCGATCCTG ATCCTCGCCG GTTTCGCGTG GGTCGGGGGC
AAGGTCGTGA CCCCGCCCGT TGCGGGCGCG ATCGAGATCG GGTCGGCCGC CGACGAAGCG
GGGCTGCGCG CGGGCGACCG GATCGTGGCG ATTGATGGCC GGGCGATTGC GACCTTTGGC
GACATCCCGA TGGCGGTCGC GCACCGCCCC GGCGAAGTGA TGCAGCTGCG CGTGCTGCGC
GAGGGCAGCG AACGGACGGT GGCGCTTGCG CCGCGACTGA TCACCGAAAA GGACCCGTTC
GGCAAGGAAT ATGAACGCGC GATCATCGGT CTCGCCCCGC CGCCGCCGCA GCTGGAACCG
GTGTCGCTGA TCGAGGCACC GGCGATCGGC TTGCATCAGA CGTGGCAGAT CGTCCGCCAG
ACCGGCGAGG TTCTGGGCCA GTTCCTCACC GGCCGGCGAT CGATCAAGGA TATGAACGGC
CCGGTCAAGA TTGCGGAGAT TTCGGGGCAG GCGGCGACGC TGGGGGTCGC CTCGCTCATA
TTCTTCATCG CGCTCATTTC CATCAATCTG GGGTTCATCA ACCTCTTGCC ATTGCCCATG
CTCGATGGCG GTCATTTGCT TTTCTATGCC TATGAAGCGA TCCGGCGGCG GCCTGCACCG
CTCCGCGTGC AGGAATGGGC ATTCCGCTTC GGCTTTGCGG CGGTGGTGAC GCTGATGCTG
GTCGTGACTT TCAACGATTT GGGCTCATTG GGGCTGTGGG ACGGGATCGC GCGCTTGATT
GGCTAG
|
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| Protein sequence | MLGPLVFVHE YGHYIVGRWC GVKAETFSIG FGRKLVGWTD KRGTEWKIGW LPLGGYVQFA
GDRDAVSQPD AEWQSLPAEE RSHTFPAQPV WKRAAIVAAG PVTNFLFAIL ILAGFAWVGG
KVVTPPVAGA IEIGSAADEA GLRAGDRIVA IDGRAIATFG DIPMAVAHRP GEVMQLRVLR
EGSERTVALA PRLITEKDPF GKEYERAIIG LAPPPPQLEP VSLIEAPAIG LHQTWQIVRQ
TGEVLGQFLT GRRSIKDMNG PVKIAEISGQ AATLGVASLI FFIALISINL GFINLLPLPM
LDGGHLLFYA YEAIRRRPAP LRVQEWAFRF GFAAVVTLML VVTFNDLGSL GLWDGIARLI
G
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