| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1934 |
|---|
| Symbol | |
|---|
| ID | 4082883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2039218 |
|---|
| End bp | 2040012 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638010311 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_616979 |
|---|
| Protein GI | 103487418 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03100] hydrolase, ortholog 1, exosortase system type 1 associated |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCATC AGCTGAGCTT CATCTGCGAA GGCGCCAGGC TCGCCGCCAC GCTCGACGAG
GCGCCGGGAG CGACCGGCCT GCTGATCGTG TCGGGCGGAA ACGAAATCCG CTGCGGCGCG
CATCGCGGCA TGGCGATGCT TGCGGCGCGC GTTGCGACCG CCGGTCATCC GGTGTTCCGC
TTCGACCGCC GCGGGATCGG CGACAGCGAA GGCACGAATT GCGGTTTCGA AAGCAGCGCA
CCCGACATTG CCGCCGCCAC CGCCGCCTTT CGCGCCGCCG CGCCGCATGT CCAGCGCGTC
GTCGCCTTTG GCAATTGCGA CGCGGCGAGC GCGCTCCTGC TCCACCAGCC GCTACCCCTC
GACGCCCTGA TCCTTGCCAA TCCCTGGACC TATGAGGCGG AGGCAATGGG GGCGGGCGAC
GCGCTGCCTC CCCCCGCCGC CATCCGCGCA CGCTACCTCG CGCGGCTCGC CGATCCCCAA
AGCCTGCTGC GCCTGCTGCG CGGCGATATT GATTTCGCCA AGCTGCGTCG CGGTCTCGCC
GCGCTCCGTG GACCCAAACC CGCGTCGGCG CCCGACGGCC TCGCCGCGCG CTTGAACGAA
GCGGCCCGGC GCCTCGCGAT CCCCGCGACG ATCCTGCTCG CGACCGGCGA CCGCACCGCG
CAGGCCTTTG CCGCCGACTG TCCCGACGCG CTAAAGCGCC TCCCCGTCGA ACGCCTTGCG
AGCCCGTCGC ACAGCTTCGC GGGCGCGGAC GGTGATTGGC TCACGGCGCG GATATTGGAG
GTTTTGGGGC GTTGA
|
|---|
| Protein sequence | MRHQLSFICE GARLAATLDE APGATGLLIV SGGNEIRCGA HRGMAMLAAR VATAGHPVFR
FDRRGIGDSE GTNCGFESSA PDIAAATAAF RAAAPHVQRV VAFGNCDAAS ALLLHQPLPL
DALILANPWT YEAEAMGAGD ALPPPAAIRA RYLARLADPQ SLLRLLRGDI DFAKLRRGLA
ALRGPKPASA PDGLAARLNE AARRLAIPAT ILLATGDRTA QAFAADCPDA LKRLPVERLA
SPSHSFAGAD GDWLTARILE VLGR
|
|---|
| |