| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1926 |
|---|
| Symbol | |
|---|
| ID | 4082783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2030975 |
|---|
| End bp | 2031967 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638010303 |
|---|
| Product | protein-tyrosine kinase |
|---|
| Protein accession | YP_616971 |
|---|
| Protein GI | 103487410 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0489] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family
[TIGR03018] exopolysaccharide/PEPCTERM locus tyrosine autokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACC AACGCAAAAT CAAGCGTCCA CCCTCGCTGC TCGAACGCGC TGCCGACATG
TTCGGGCTCG ACCCCGTCGG CAATGCGCCG ACGATCGACG TATCGAGCCT GCCGCCCGAA
CCGGAGAAGA AGGCGAAGAA GGTCAAGGCG GAGCCCGTCG CCGGTGCGCC GACCGCCGAA
CACTGCGAAC CCGTCGTCGA AACCGCACCG TCGCCGGGCA AGGAGCTTGC AAAGGCCGCG
CCCGCGATCG TGCCGACGCG GCAGGGGACG ATCGATCGCG AGCGGCTTGC GGCGCACGGG
ATGGTCGTGC CGGGCACCCC GGTCACGGGC ATTTCCGAAG AATATCGCAT CGTGAAGCGC
GAGTTGATCC GCAATATCGG CGGCGCGGGC AATCGCCCGA TCCTGCCGCG CGGGCACCGC
GTGCTGATCG CCTCGGCCAA TCCGGGCGAG GGCAAGACCT TTTCGGCGGT CAATCTGGCG
CTCAGCCTGG CAGTCGAGGC CGATCACGAC GTGCTGCTGA TCGACGCCGA CATTGCGAAG
CCGAGCGTGC TCGACACGCT CGGGCTGGAA AATGGCCCCG GCCTGATGGA TGCGCTCGCC
GACCCGCATC TGGCGGTTGG CGACTGCCTG ATCCAGACCG ACATTCCGGG GCTGAAAGTC
ATGCCCGCGG GCGCGCATCA CATGCACGAC ACCGAATTGC TCGCCTCGGC GCGGACGGAG
GCGCTGCTCG CGCAGCTCGA AGCCGGGGCG CCGGGGCGCA TCCTGATCCT CGATTCGCCG
CCGATTCTCG CGGCATCGCC CGCGGCGGTG CTCGCGGGGC ATGTCGGACA GACGATCCTG
GTCGTGCGCG CCGACACGAC GCTTGAAAGC GCGCTGCGCG ACGCGATCGG GCTGATGGGC
GCGTGTCCGC AGATCCAGCT GCTTCTGAAC GGGGTCAAAT TCTCGCCGGG CGGGCGCCGC
TTCGGCACCT ATTACGGACA GGGAAGCGCC TGA
|
|---|
| Protein sequence | MNDQRKIKRP PSLLERAADM FGLDPVGNAP TIDVSSLPPE PEKKAKKVKA EPVAGAPTAE
HCEPVVETAP SPGKELAKAA PAIVPTRQGT IDRERLAAHG MVVPGTPVTG ISEEYRIVKR
ELIRNIGGAG NRPILPRGHR VLIASANPGE GKTFSAVNLA LSLAVEADHD VLLIDADIAK
PSVLDTLGLE NGPGLMDALA DPHLAVGDCL IQTDIPGLKV MPAGAHHMHD TELLASARTE
ALLAQLEAGA PGRILILDSP PILAASPAAV LAGHVGQTIL VVRADTTLES ALRDAIGLMG
ACPQIQLLLN GVKFSPGGRR FGTYYGQGSA
|
|---|
| |